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EMAGE:13146

Tshz2 teashirt zinc finger family member 2 ( MGI:2153084)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146
"Pseudo-wholemount" of euxassay_017274. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017274_01 euxassay_017274_02 euxassay_017274_03 euxassay_017274_04
EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146
euxassay_017274_05 euxassay_017274_06 euxassay_017274_07 euxassay_017274_08 euxassay_017274_09
EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146
euxassay_017274_10 euxassay_017274_11 euxassay_017274_12 euxassay_017274_13 euxassay_017274_14
EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146
euxassay_017274_15 euxassay_017274_16 euxassay_017274_17 euxassay_017274_18 euxassay_017274_19
EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146 EMAGE:13146
euxassay_017274_20 euxassay_017274_21 euxassay_017274_22 euxassay_017274_23 euxassay_017274_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:13146Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
13146_wholemount_strong.wlz
13146_wholemount_moderate.wlz
13146_wholemount_weak.wlz
13146_wholemount_possible.wlz
13146_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:13146_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9365
Entity Detected:Tshz2, teashirt zinc finger family member 2 ( MGI:2153084)
Sequence:sense strand is shown

>T9365
CTGCGGCCCCCGCGCGCGGCTCGGGGCTGGGGCGCCAGAAGTGAGACTGGAGCTAAGTAGAGCGATGCCA
AGGAGGAAACAGCAGGCACCCAAGCGGGCGGCAGGGTATGCCCAGGAGGAAGTCCTGAAGGAAGAGGAGG
AAATAAAGGAAGAGGAGGAGGAAGAAGAAGACAGTGGCTCCGTTGCTCAACACCAGAGCAGCAATGACAC
TGGGACAGACGAGGAACTAGAAACGGGCCCAGAGCAGAAAGGCTACTTCAGCTGCCAGAACTCACCGGGG
AGCCACCTGTCCAATCAGGATGCAGAAAACGAGTCTCTCCTGAGCGATGCCAGCGACCAGGTGTCAGACG
TCAAAAGTGTCTGTGGCCGAGATGTTTCAGACAAGAAAGCAAACACTCACCCCAAACTTCCAAGCGAACC
CCATAACTGCATGGATAAAATGACAGCTGTCTATGCCAATATCCTGTCAGATTCCTACTGGTCGGGCCTG
GGCCTCGGCTTCAAGTTATCCAACAGTGAGAGACGGAATTGCGACACTCTCGTGGAGCTGACCGTGCACA
TGAACGAGACAGGCCACTATCAAGATGACAACCGCAAAAAAGATAAGCTCAGACCCACGAGCTACTCCAA
GCCCCGAAAAAGGGCCTTCCAAGACATGGACAAAGAGGATGCCCAAAAGGTCCTGAAATGTATGTTTTGT
GGTGACTCCTTCGATTCCCTGCAAGATTTGAGTGTCCACATGATAAAGACAAAACATTACCAAAAAGTGC
CTTTGAAGGAGCCGGTACCAACCATTTCCTCCAAGATGGTCACACCAGCCAAGAAGCGTGTTTTCGATGT
CAACAGGCCTTGCTCCCCTGACTCCACCACAGGGTCCCTTGCAGATTCCTTTTCTTCCCAGAAGAGTGCT
AACCTGCAGCTGCCCTCCAACAGCCGCTACGGCTACCAAAACGGCGCCAGCTACACCTGGCAGTTCGAGG
CCTGCAAGTCCCAGATCTTAAAGTGTATGGAGTGTGGCAGTTCCCATGATACTTTGCAACAACTCACCAC
CCACATGATGGTCACAGGCCACTTTCTCAAAGTCACTAGCTCTGCCTCCAAGAAAGGAAAGCAACTTGTG
TTGGACCCCCTAGCTGTGGAGAAAATGCAGTCACTGTCTGAGACCCCAAACAGTGAGTCTCTGGCCCCTA
AGCCATCAAGTAACTCCCCCTCGGAGTGCACAGCCTCTACCACCGAGTTAAAGAAAGAAAGCAAGAAGGA
GAAGGGAGAGGGCATTGAAGACGAACAAGGTGTGAAAAGCGAGGACTACGAAGACTCTCTACAGAAACCT
CTCGACCCCACCATAAAATACCAGTACCTAAGAGAGGAGGACTTGGAAGACGGCTCGAAGGGTGGTGGGG
ACATTTTAAAGTCACTGGAAAATACCGTAACCACAGCCATCAACAAGGCCCAGAATGGTGCTCCCAGCTG
GAGCGCATACCCAAGTATCCACGCAGCCTACCAGCTCTCAGAGGGCACCAAGCCACCTATGGCAATGGGC
TCTCAGATACTGCAAATCCGACCCAACCTCGCCAACAAGCTGAGGCCCATTGCACCCAAATGGAAAGGTA
TGCCACTCGGCCCTGTCCCCACAAGCCTGGCTCTGTACACTCAAGTCAAGAAGGAGACAGAAGACAAAGA
TGAAGTCGTGAAGCAGTGTGGGAAGGAAAGTCCCCACGAAGAGGCAACATCTTTCAGTCAGCCTGAGGGC
GAGTCTTTCTCCAAAATTGAACCACCTTCAGAATCCAGAAAGGCTGAGCCCTGTCCCCTGAAAGAGGAGG
AGAAGCCGCAGAAAGAGAAACCGGAGCCCTTAGAACCAGTATCTTCTCTGACCAATGGCTGTGCGCCGGC
TAACCACACCCCGGCTCTGCCTTCCATCAACCCGCTCAGTGCCCTGCAGTCCGTCCTGAACAACCACCTG
GGCAAAGCCACGGAGCCCTTGCGCTCCCCTTCCTGCTCCAGTCCCAACTCAAGCACAAGCCCCGTGTTCC
ATAAATCCAGCCTCCACGTGGTGGACAAGCCGGTCATAAGTCCCACCTCCACCAGGCCGGCGGCCAGCGT
GGCCAGACACTACCTGTTTGAGAACACCGACCAGCCCATTGACCTGACCAAGTCCAAAAGCAAGAGAGCC
GAGTCCTCGCAAGCACAATCCTGCACGTCCCCACCTCAGAAGCATGCTCTGTGTGACATTGCTGATATGG
TCAAGGTCCTCCCCAAAGCCACCACCCCAAAGCCAGCCGCCTCCTCGAGGGTCCCTCCTATGAAGCTGGA
AATCGACGTCAGACGCTTCGAGGATGTTTCGAGCGAAGTCTCCACTTTGCACAAAAGGAAAGGCCGGCAG
TCCAACTGGAACCCCCAGCATCTTCTCATCCTGCAAGCTCAGTTTGCCTCGAGCCTCTTCCAGACCTCAG
AGGGCAAATACCTGCTTTCTGACCTGGGCCCCCAAGAGCGGATGCAAATCTCCAAGTTCACCGGACTCTC
CATGACCACAATCAGCCACTGGCTGGCTAACGTCAAATACCAGCTTAGGAAAACAGGTGGGACAAAGTTC
CTGAAAAACATGGACAAAGGGCACCCCATCTTTTACTGCAGTGACTGTGCGTCCCAGTTCAGAACCCCCT
CTACCTACATCAGCCACCTAGAGTCTCACCTGGGCTTCCAAATGAAGGACATGACCCGGATGGCGGCTGA
CCAGCAAAGCAAGGTGGAGCAGGAGATCTCCCGAGTGTCGTCGGCTCAGAGGTCTCCAGAAACAATAGCT
GGCGAAGAGGACACAGACTCTAAATTCAAGTGTAAGTTATGCCGTCGGACATTTGTGAGCAAACACGCAG
TAAAACTCCACCTAAGCAAAACGCACAGCAAGTCACCCGAACACCACTCTCAGTTTGTAGCAGACGTGGA
TGAAGAATAGTTCTGCAGGTATGGGGTTTGCTCCCAGGTGACGGTGACCACGGCCTTGTGAGGAGCTTGT
TAAAAAGAGATGGGTCTGCTTAGAAGCAGAGGCGTCTCCCGAGGCCTGGCAGGACCTTAGTTTGCTGCCA
TAGACTTAACTTTTACAAAAGACAGGACGGGATGAGTGGCTCCTAGCCATTCCCCCAACATCCTCTAGTT
TAGAGGGGAAGCAGGATACAATGTATCTAAGAGAGATGAAGCTCGTGGTTGTTCCTAGAGCTCCAGGACT
CACGGTTCCTTTAGCAACCTAAGGCCCAACCTCCAAGGTCCAACTTCCCCTCATTTTAATTAACAAGGAC
TAGATTCCATTTTGCCATCTGCCTTCCCACAGCAATGCTTAATACTTACCGAGTGGGGAAAGGTGGCACC
AGAATGAAGACGGTGGGGGGAGGGGGACTTCCTAGGGACCGTTATATACAGAGATAGCTTAATCAGTTCA
CGAATGGCTTAATGATATCTTTACTATCAGCCCTTGCAATGAATCCATTTGGTAGCTGACTTTTATCGAC
AGCGCTCCTTCCCTGTTTCCTTCCTACATTCATATCCCTATAGAAGAGCAGGGACCCTTAAGGGGGACTG
TCGGGATGCACTCTTCTATGGAGCAGGGAGATAAAAATGCCTTTAGATTTTCCTTTAGGATAAACTCGGG
ATCAGAGTCCACCTTTACCAGATGCAAAACATCCCCGTGGGTTTATTTCACATACAGAGATGGGTAGTCG
AAGGCTGTACACAGCCAAGTGAGTAGGGTCTGTCCAACAGCTTCAAGATGTTATTTTTCAAATTGGGCTG
GAGGTGCACCTTGGTAGTAGAGTTCTTGCCCAGCATACACAAGGTCTTGGGTTCAAGTCCCAGTACCAAA
ATGAGAAAAGAAAGGAATTTGTACCATGTATCATAGAAGTCCACGCCTTGCTTTGTTACCAATGCCCAAA
GTTATTTATGTCACCTCCAGGAGAAAGGACAGAGACGACCAAAGGCAAATACTTTATAGCAAATTAGTCA
CATGTAGGCTGCTTCCAAATCTTGAGCTTAAGCAAGGCTGGATGCCACCCAAGCTCCTTCATGGGGTTCC
TCTGCTTCCTCTTCTCTCCCCTCCAGCATGGCACGCCCACGCGCTAGGGAGCCCAACACACATCCAGACT
GAACTCAAGGGCCCAAACCCGAGCGAAGGGTTCTGTACTTTACAGTCCAGCACATGCCCCCACAGCGTTA
CGGAATTGCTCTTAGTTAATTCACGACAAGGTATGGAAAGCTTATCCTAGGAGCCCTCACCACCCACCCC
CTCTTCGCAAAGCTTTTACTTTTACCCAGGAAACTTTCGGGTCAAGCTGCACAGGCACAGGCGCTAAGGG
AGTTCCAGATAGAGAAATGTCCTGTGTGACGCGCTCCTAGCGCTCCTCACAGAGCTAGAGAGCGAGTGGG
AAGATGGGCAGAAAGAAAGGGAAATATGTGCTTGACTCGAGACTCTTCCCTCCAGGTGGGAATCCATGCT
TCTGATTTGGGTGGGGCCCCCCCAGAGGGCTACCCCTACTGTTTGCATGCCTTTATCATGATAATTAAAT
GTTCCGGGCAGATTCACCTCCGGGATTCCAAGCATGACTGTACATCTTACCTTATTGAATGGAAAGCTAT
TTTGCATCTGTTGAGCCCAATGTGAGCTCTGGGTTCTGCCACATGCTATTTATTTACCATATCACATTTT
AAATTTTTATGTAATTAGCCATTATGCTCTTCTGGTCCTTAAAAAAAAAAAGGTGGACATACATAAAGAA
CCTAGAGACAAGAAGTATGTTTTAAATCTAATAATTGTGGGTCCAAACCCCGGCGAAGAGAACAAATAGG
TGATGTTTATTTTGTGCTATAATAAAGACCAATTTTCCACCTGTTAAAAAAAAAAAAAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:6852953 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6852953 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:13150 same embryo
 EMAGE:13149 same embryo
 EMAGE:13148 same embryo
 EMAGE:13145 same embryo
 EMAGE:13147 same embryo
 EurExpress:euxassay_017274 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS