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EMAGE:17094

Med29 mediator complex subunit 29 ( MGI:1914474)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094
"Pseudo-wholemount" of euxassay_001480. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001480_01 euxassay_001480_02 euxassay_001480_03 euxassay_001480_04
EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094
euxassay_001480_05 euxassay_001480_06 euxassay_001480_07 euxassay_001480_08 euxassay_001480_09
EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094
euxassay_001480_10 euxassay_001480_11 euxassay_001480_12 euxassay_001480_13 euxassay_001480_14
EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094 EMAGE:17094
euxassay_001480_15 euxassay_001480_16 euxassay_001480_17 euxassay_001480_18 euxassay_001480_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17094Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17094_wholemount_strong.wlz
17094_wholemount_moderate.wlz
17094_wholemount_weak.wlz
17094_wholemount_possible.wlz
17094_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17094_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4469
Entity Detected:Med29, mediator complex subunit 29 ( MGI:1914474)
Sequence:sense strand is shown

>T4469
GCGGAGGAAAATGGCTGCGCCCCAGCCACAGGCTGCAGCGGTTTCCTCTGCGTCTGGTGTGTCAGGCCCG
GGTTCTGCCGGGGGTCCGGGTCCCCAGCAACAGCCACAACCGACCCAGTTGGTGGGTTCTGCCCAGAGCG
GGCTCCTGCAGCAGCAGCAGCAGGACTTCGATCCTGTGCAGCGCTACAAGATGCTCATCCCGCAACTGAA
GGAGAGTCTCCAGACTTTGATGAAGGTTGCAGCCCAGAATCTGATTCAGAACACTAACATTGACAATGGA
CAGAAGAGCAGTGACGCACCCTTGCAGCGCTTTGACAAGTGTTTGGAGGAGTTTTACGCACTCTGTGATC
AGCTGGAACTCTGCTTGCGCCTGGCCCACGAGTGCCTTTCACAGAGCTGTGACAGCGCCAAACACTCTCC
AACACTGGTACCCACAGCCACAAAGCCAGATGCAGTGCAGCCAGACAGTCTGCCCTACCCACAGTACCTG
GCTGTCATCAAAGCCCAGATCACCTGTGCCAAAGACATTCATACTGCCCTGCTGGACTGTGCCAACAAGG
TCACTGGAAAGACTACTGCACCCTCTACTGGCCCTGGGGGCAGCCTCTGAGGTCTTTCGGGGAGGGGCAG
AGAATGAAGTATGGCCTGAGGCAAAACAGGTGGTTCCTGTTGCTGATTTATTTGTCCGTGCCACAGTAAT
GCAGCTGAAACCAGCAGGGGGCAGCAGAGTCTTGCAGACAGCACAGACCTCAAACCCCACCACCACCACA
CCACTGTTGCCTCCACCCACGCTGCTCCCCAACCTGGAGTGGACCTTCCCACTGGGCCGATGATTACCTC
TGTTCTGGGGACTCTGACTCCCCACCTGGCCCTGGGTTAGCACTAACTGAGCCCTTTAGACCTTCCTCAG
TCTGTCCCAGTGTATGGATTTCCTTTTAACCCACCTTTTTCCAGTCCTGCCATCCTATCTCAATCAGTCC
CCTTTTGTTGCCCCCAACACCTAACTGGGATCGTATTATACAAGAGGAACCAAAATGCCTGGGTTACTAG
GGCTACAGGAAGGGACTTTCTGGCTCACAAAAGCAGCGCGTGAACGTAAGCCCTGACCTCAGCACAGACA
ACCTAGGAGAAGTTTGGGTCCACATTGGACCCTGCGTCAGCAGAGCTCTCTAGCTGTTCTGGGGAGGGGC
CGAGGGGGGATATTGTGCAATGTGTGGGGAGGCCTGCTCAACAAGACTCCTTGGTCTCTAAAAAAAAAAA
AAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4947722 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4947722 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17092 same embryo
 EMAGE:17096 same embryo
 EMAGE:17097 same embryo
 EMAGE:17093 same embryo
 EMAGE:17095 same embryo
 EurExpress:euxassay_001480 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS