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EMAGE:17095

Tspan8 tetraspanin 8 ( MGI:2384918)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095
euxassay_001486_01 euxassay_001486_02 euxassay_001486_03 euxassay_001486_04 euxassay_001486_05
EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095
euxassay_001486_06 euxassay_001486_07 euxassay_001486_08 euxassay_001486_09 euxassay_001486_10
EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095
euxassay_001486_11 euxassay_001486_12 euxassay_001486_13 euxassay_001486_14 euxassay_001486_15
EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095 EMAGE:17095
euxassay_001486_16 euxassay_001486_17 euxassay_001486_18 euxassay_001486_19 euxassay_001486_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17095Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17095_wholemount_strong.wlz
17095_wholemount_moderate.wlz
17095_wholemount_weak.wlz
17095_wholemount_possible.wlz
17095_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17095_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4467
Entity Detected:Tspan8, tetraspanin 8 ( MGI:2384918)
Sequence:sense strand is shown

>T4467
CGGGCTTTGAGAAGCCATCATAAATATCCTGACCTAATGCCTTAGCAGCCATAAGAAGGAAAAGAATGTA
CTCGCCTGAAGATAACGTTTGAGATATTTAAAGGTGTGGGTTAATTTTTTATCCACTCCAATAACTGTTG
GTTTTTTTTTTTTCTTTTTTTTCTGTTCCTTCTGTCTACTTCTTTGCTCTCTATTTCTACCCCCGAAGCT
GCAGGCACACGGATCTCTGCAGGCAAAATCCGTCAGAGCCTACGCAGGACAGCCTTCTACGGACTTCTTC
ATTCCACTGTAACTTGGTGGCTGCCCCTTCTCCGAAATGGCAGGTGTGAGCAGCTGTTTAAAGTATTCTA
TGTTTTTCTTCAACTTCTTGTTCTGGGTATGTGGTACACTGATCTTGGGACTGGCCATATGGGTGAGAGT
AAGCAAAGATGGAAAAGAGATCATCACGTCAGGAGACTCTAGCACGAACCCCTTCATTGCTGTGAATATC
TTGATTGCAGTTGGGTCTATCATCATGGTTCTAGGTTTCCTGGGATGCTGTGGAGCTGTGAAAGAAAGCC
GGTGCATGCTTCTCTTGTTTTTTATCGGCTTGCTGCTGATTCTGATTCTGCAAGTGGCAGCAGGCATCCT
AGGAGCCGCTTTCAAACCTGAGTATAACCGAATTCTGAATGAAACGCTATATGAAAATGCTAAGCTTCTG
TCGGACAACACTGATGAGGCAAAAGACTTCCAGAAGGCCATGATTGTGTTTCAGTCGGAGTTCAAGTGCT
GTGGCTTGGAGAATGGAGCTGCCGACTGGGGAAATAATTTTGTGGAGGCAAAAGAGTCATGTCAATGTAC
AGGAACTGACTGTGCAACTTATCAGGGGAGTTCCGTTTACCCAAAGACCTGTCTTTCTTTGATCAAAGAT
CTGTTTGAAAAGAACATTATTATTGTCATTGGAATTGCTTTTGGACTGGCCGTTATTGAGATTCTCGGTT
TGGTGTTTTCTATGGTGCTATACTGCCAGATTGGAAGCAAGTGAACCTGAGGATTTACCTAGTCATCATA
AACACCATTTGAGTTTTTGCTTTGGCTTCATGACTTTAAATACTCGAATACTGTAAATAAATGTTATTGA
AGTATCTCACTGAGGCAGTCTACAGATATCTTCACAGGTATTCACTGTATTTAACTGTGAAGGACATAAT
ACAAATGGTTGTGTATTTTTTTTTTTCTCTCACAATAAAAAGTGTTGGTGTTGAAAAAAAAAAAAAAAAA
AAAA
Notes:The probe template was PCR amplified from IMAGE:4947699 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4947699 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17094 same embryo
 EMAGE:17092 same embryo
 EMAGE:17096 same embryo
 EMAGE:17097 same embryo
 EMAGE:17093 same embryo
 EurExpress:euxassay_001486 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS