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EMAGE:19411

Myl12a myosin, light chain 12A, regulatory, non-sarcomeric ( MGI:1914518)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411
"Pseudo-wholemount" of euxassay_004789. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004789_01 euxassay_004789_02 euxassay_004789_03 euxassay_004789_04
EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411
euxassay_004789_05 euxassay_004789_06 euxassay_004789_07 euxassay_004789_08 euxassay_004789_09
EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411
euxassay_004789_10 euxassay_004789_11 euxassay_004789_12 euxassay_004789_13 euxassay_004789_14
EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411
euxassay_004789_15 euxassay_004789_16 euxassay_004789_17 euxassay_004789_18 euxassay_004789_19
EMAGE:19411 EMAGE:19411 EMAGE:19411 EMAGE:19411
euxassay_004789_20 euxassay_004789_21 euxassay_004789_22 euxassay_004789_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19411Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19411_wholemount_strong.wlz
19411_wholemount_moderate.wlz
19411_wholemount_weak.wlz
19411_wholemount_possible.wlz
19411_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19411_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6485
Entity Detected:Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric ( MGI:1914518)
Sequence:sense strand is shown

>T6485
GGCTGAGCAGGGATTTAACCGCCACCATGTCTAGCAAAAGGGCAAAGACCAAGACCACCAAGAAGCGCCC
TCAGCGCGCAACCTCCAATGTGTTCGCCATGTTTGACCAGTCCCAGATCCAGGAGTTCAAAGAAGCCTTT
AACATGATTGACCAGAACCGGGATGGCTTCATTGACAAGGAGGACCTGCACGACATGCTGGCGTCAATGG
GAAAAAACCCAACTGACGAATACCTGGACGCCATGATGAACGAGGCCCCGGGCCCCATCAATTTCACCAT
GTTCCTCACCATGTTTGGGGAGAAGCTGAACGGCACTGACCCCGAGGACGTCATCAGAAACGCCTTCGCT
TGCTTTGATGAGGAAGCCATCGGCACCATCCAGGAGGATTACCTGAGGGAGCTGCTGACCACCATGGGCG
ACCGCTTCACAGACGAGGAGGTGGATGAGCTGTACAGAGAGGCCCCCATTGACAAAAAGGGGAACTTCAA
CTACATTGAGTTCACACGCATCCTGAAGCACGGCGCGAAAGACAAAGATGACTGAAGAGCTGCGGCGGCT
TCCAGCCCATTGCTCCCGTTGCCATTGGGGTATTTCTGAGATTTTCTCCTGGAGCCCAATGCATGCCCTA
GCTTTATTGCTTTTTGCCTTTCTTGTTTTATATTTATTCTCAGCCATTTTGGGCCACATGTACCTTATAA
TACTGGAAATGGGACCTTCTGTCATTGTGATGAGAAAGTAAGTTCATTTAACTTACAGGCAGTCTTGTCC
CTTGTAATAACTGCAGCCCAGAATCAATATATTTTTTCAGAGAAAGTTATCCACTCAATTTTTTCTGATT
TATAATTAAACTTTCTGATAAAATGCTTAGTTGTTTAGCGTTATTTGCCACTTGACTTTTAGTTTCACGT
ACGCCTTTCTCTCTAAGCACCGTGGGCCAAGTGAATGACAGTCCTGTCAGGGTTTGGTCCGACTGCTTCC
AGTTGTGTTATTAAAGCAATCCTGGTTTTCTCTGCTCCTGTTCATTTCTCCCTCCAGGGAAATCAGATAA
AGCCCGAGTTGGGGGCCCTAGACTTTGTCTTTCTTTTGGAAGATAGTTCCTGCAGAATTGTGACCCTGCA
TTAGCTCTGCCGCCAGCTGGATGGACCTGCTTTACCTAGTCCATGTAAACTTCCTGCCACCGAAACTAGC
AGCCGCTGAGCACACTAAGTTTTCTGTGTTCTATTTTAAAGGTTCTTTGGAATGCTTTTAACAAAAAGGA
CAGATTTCGCTGTGTTTCCAGCTGTTGGAAATATAGTATTTTTTTTTGTATACAGTTTTTCCTTATTATA
ACAACCCCTATTAAAAGACCTGTTTGTTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3588394 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3588394 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19407 same embryo
 EMAGE:19408 same embryo
 EMAGE:19409 same embryo
 EMAGE:19410 same embryo
 EMAGE:19412 same embryo
 EurExpress:euxassay_004789 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS