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EMAGE:29439

Clcn5 ( MGI:99486)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439
euxassay_003763_01 euxassay_003763_02 euxassay_003763_03 euxassay_003763_04 euxassay_003763_05
EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439
euxassay_003763_06 euxassay_003763_07 euxassay_003763_08 euxassay_003763_09 euxassay_003763_10
EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439
euxassay_003763_11 euxassay_003763_12 euxassay_003763_13 euxassay_003763_14 euxassay_003763_15
EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439 EMAGE:29439
euxassay_003763_16 euxassay_003763_17 euxassay_003763_18 euxassay_003763_19 euxassay_003763_20
EMAGE:29439 EMAGE:29439 EMAGE:29439
euxassay_003763_21 euxassay_003763_22 euxassay_003763_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6986
Entity Detected:Clcn5, ( MGI:99486)
Sequence:sense strand is shown

>T6986
GTTTGTTGCTGTTAAAAGCCGAGAAAGCAGCAAGTTCCCTTCTAAAGCTCCCCAGAGCGGGCGTCCTGTA
AAAGCACCTCAACCTAAATGAGCAAATACGGGCTGCCAAGGTTGTTTCTTCCTTGAGGCAGAAAAAAAGA
AAACTGTGAACGAAGGGAACAAGTCATACAATGGTGGTGGAATAGGCTCTTCAAATAGAGTCATGGACTT
CTTGGAGGAGCCAATCCCTGGTGTAGGGACCTATGATGATTTCAACACAATTGATTGGGTGAGAGAGAAA
TCTCGAGACCGAGATAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTCACA
GTGTGAGCGATGCTTTCTCTGGCTGGTTGTTAATGCTCCTTATTGGCCTTTTATCAGGTTCCTTAGCTGG
CCTGATAGACATCTCTGCTCACTGGATGACAGACTTAAAAGAAGGGATATGTACAGGGGGGTTCTGGTTT
AACCATGAGCACTGTTGCTGGAATTCTGAGCATGTTACCTTTGAACACAGAGACAAATGTCCAGAGTGGA
ATACCTGGGCCCAGCTCATCATCAATACAGATCAGGGAGCCTTTGCCTACATAGTCAATTACTTCATGTA
CGTCCTCTGGGCTCTTCTGTTTGCTTTCCTTGCTGTATCTCTTGTCAAGGCATTTGCACCTTATGCCTGT
GGTTCTGGAATCCCTGAGATCAAAACCATCCTGAGTGGTTTCATTATTAGAGGCTATCTGGGTAAGTGGA
CCCTTGTCATCAAAACTATCACTTTGGTGTTGGCGGTGTCATCTGGCTTGAGCCTGGGCAAGGAGGGCCC
CCTGGTGCACGTGGCTTGCTGCTGTGGGAACATCTTGTGCCACTGCTTCAACAAATACCGGAAGAATGAA
GCCAAGCGGAGAGAGGTCTTATCAGCTGCAGCGGCTGCCGGTGTATCTGTAGCCTTTGGGGCCCCTATTG
GTGGAGTATTATTCAGCCTGGAAGAGGTCAGCTACTACTTTCCCCTCAAAACACTATGGCGTTCTTTCTT
CGCTGCTCTGGTGGCAGCGTTCACACTCCGCTCCATCAATCCATTTGGAAACAGCCGCTTAGTTCTGTTT
TATGTAGAGTTCCACACCCCGTGGCATCTCTTTGAGCTCGTGCCATTCATTGTACTAGGCATATTCGGTG
GCCTTTGGGGAGCTCTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGTAAAACCACACAGTTGGG
CAAGTATCCTGTCGTCGAGGTACTCATTGTGACGGCCATCACTGCCATCTTGGCTTTCCCCAATGAATAT
ACCCGGATGAGCACAAGTGAGCTCATTTCTGAGCTGTTCAATGACTGCGGCCTCCTGGACTCCTCCAAGC
TCTGTGATTATGAGAACCACTTCAACACAAGCAAAGGCGGTGAGCTGCCTGACAGACCTGCTGGCGTGGG
CGTCTACAGTGCCATGTGGCAGCTGGCTCTGACACTCATACTGAAAATAGTCATTACTATATTCACCTTT
GGCATGAAGATTCCTTCTGGTCTCTTTATCCCCAGCATGGCTGTCGGTGCTATAGCAGGCCGTCTTTTAG
GAGTCGGAATGGAGCAACTGGCTTATTACCACCACGACTGGGGCATCTTCAATAGCTGGTGTAGTCAGGG
AGCTGATTGTATCACCCCTGGCCTTTATGCCATGGTTGGGGCTGCTGCCTGCTTAGGTGGGGTGACTCGG
ATGACTGTTTCTCTTGTTGTCATAATGTTTGAACTGACTGGTGGCCTGGAATATATTGTGCCTCTGATGG
CTGCAGCTATGACAAGCAAGTGGGTGGCTGATGCTCTTGGGCGAGAGGGCATTTATGATGCCCACATCCG
TCTCAATGGATACCCCTTTCTTGAAGCCAAAGAAGAATTTGCTCATAAGACTCTGGCAATGGATGTGATG
AAGCCCCGGAGAAATGACCCCTTGCTGACTGTCCTTACTCAGGACAGTATGACTGTGGAGGATGTCGAGA
CCATAATCAGCGAAACCACGTACAGTGGCTTTCCGGTGGTAGTGTCCCGAGAGTCGCAAAGACTTGTAGG
CTTTGTTCTTCGAAGAGATCTCATTATTTCAATTGAAAATGCTCGGAAGAAACAGGACGGGGTTGTGAGC
ACTTCCATCATTTATTTCACGGAGCATTCGCCTCCAATGCCTCCATACACCCCACCTACCCTGAAGCTTC
GGAACATCCTGGACCTCAGCCCCTTCACTGTGACAGACCTTACGCCAATGGAGATCGTGGTGGACATCTT
CCGCAAGCTGGGCCTGCGCCAGTGCCTGGTTACACACAACGGGCGCTTACTTGGAATCATCACCAAAAAG
GATGTGTTAAAGCATATAGCACAGATGGCAAACCAAGACCCTGATTCCATTCTCTTCAACTAGAATCATG
GGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCATGGATATATTTTATTAACTGGGTACCCAAAAC
ACATTTCCCATATTTGGATGGTGAAGTCATATTAGTGTGTTGTCTGTTTCCTACAAGTTAATCAGTTGCA
CTACATAATTTCTGGAAAATAATCTCTTTAGGAGAAAATACAGTTAGGCTTCTGTGATACTGCATTAGGA
AGGGTTCACGAAAGAGTAAACAAGATGGCTATGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3989812 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3989812 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003763 same experiment
 EMAGE:31244 same embryo
 EMAGE:31886 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS