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EMAGE:31192

Mycbpap ( MGI:2388726)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192
euxassay_003771_01 euxassay_003771_02 euxassay_003771_03 euxassay_003771_04 euxassay_003771_05
EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192
euxassay_003771_06 euxassay_003771_07 euxassay_003771_08 euxassay_003771_09 euxassay_003771_10
EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192
euxassay_003771_11 euxassay_003771_12 euxassay_003771_13 euxassay_003771_14 euxassay_003771_15
EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192 EMAGE:31192
euxassay_003771_16 euxassay_003771_17 euxassay_003771_18 euxassay_003771_19 euxassay_003771_20
EMAGE:31192 EMAGE:31192 EMAGE:31192
euxassay_003771_21 euxassay_003771_22 euxassay_003771_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
lateral ventricle choroid plexus
strong strong
regionalstrong expression: see section 06 07 08 09 10 11 12 13 14 15 16 17 18 19
4th ventricle lateral recess
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 moderate expression: see section 01
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6997
Entity Detected:Mycbpap, ( MGI:2388726)
Sequence:sense strand is shown

>T6997
CGGCACATTGCCTTGCGGAAGAAGCAACAGGAAGCTCTCAGCAAGCACCTGAAGAAGCCAGCCAGTGAGC
TGTTGATGCATACCGGGGAGAGCTATAGGAAGATCCAGGAGGAGCGCGAGGTCATTGACCGTGCACTTCC
CACCCAGCATGACGGAAAAGCAACCAGTTGGTTCTGGAGTCCACTGGAATACCTGGGTGATGAGATGACA
GGTCTTCTCATGACCAAAAAGAAAACTCAGCGTGGTCTGGTGGAACCCATCACACACATCAGGAAGCCCC
TCTCCATCCAAGTGGAGACTGGATTACCAGCCCAGAAGGATGCTTGGTACCGCTACACCTGGGACCGGAG
TCTGTTTCTGATCTACCGACGCAAGGAGCTGCAGAGTATCATGGCAGAGCTGGATTTCAGCCAGCAGGAT
ATCGATGGCCTGGAGGTGGTGGGCCATGGGAAGCCCTTCTCATCTGTCACAGTGGAAGAACATTTGCCAC
CTGAAAAGATCCAGAAGAGCTCCTCGGAAGACACGGTATTTCTAGACTCCTTGACCAACCTCTCCGACAT
GGTCCCCATGCCTATTCTCGGCCCTTCGCTGCTGTTCTGTGGGAAGCCAGCTTGCTGGGTCAGAGGCAGT
AACCCAGAGGACAAGAAAAACATCGGAATTGGTGTCCGCCTGACATTTGAAACCCTTGAAGGGGAGAGAA
CGTCCTCAGAACTGACTGTGGTCAATAACGGCACGGTGGCCATTTGGTACAACTGGCGAAGGCGGCCCCA
CCAGGATTTTTTCCAAGACCTAAAGCAAAACAAGACGCAGAGGTTTTACTTTAACAACCGGGAAGGTGTG
ATTCTGCCCGGGGAAACCAAACACTTTACCTTCTTCTTCAAGTCTCTGAATGCTGGCATCTTCAGGGAAT
CTTGGGAGTTTGGGACCCACCCTACGCTCCTGGGAGGTGCTGTCCTTCAGGTCACCCTCCATGCCATCTC
ACTGACCCAGGACATTTTTATGGATGAGAGGAAGTTGTTGGAGACAAAGCTGGCTGCCCACGAGGCCATC
ACCATTGCCCAGAGCGTGCTGCAGGACTTACTGAGGGGCATCTCCACGCCAGAGCGCACACCATCCCCGG
TGGACGCGTATCTCACCGAGGAGGACTTGTTCAACTACAGGAATCCTAGGTTGCATTACCAGCATCAAGT
GGTGCAAAACTTGCACCAGCTGTGGCAACAGTACAGGAAGGCCAAGGCAACCCAGAAGGAAACCCCCAGC
CTCAGAACTCCAGTGCCGTTACTGTTGGTGGAGAAGGCCTCAGGTTCGATAAGCCCCAGGAACCTGGTCT
CAGAGTACTCGCAGCTGTCGCCGCATCAGGAGATGGACACCGCCAGGAAGACTCGGGACTTCTTCCTGTC
TCTGAAGTCTAGCATAGGAAAGAAGAGTGTGGCACGGAAGAGCATTATGGAGGAACTGCTGGTGGAGGAG
GGTCCGGACAGGGAGACCACCCAGCGCCCCTGGGCTCTGAAAAGCGTTTCCCCGCCTAAGTGGAACCTGT
GTCTAGAGGACTTCAGACAGGCAGTGATGACCTTCCCCGAGGAGCTCCAGAGAGAGGATGCCCTCATCCA
GCTCAACAAGGCGGCAATGGAGCTGTGTCAGGAGCAGAAGCCACTGCAGTCGGACCTCCTATACCAGATG
TGTCTGCAGCTGTGGCGAGACGTGATTGACAGCCTGGTAAGCCAGTCCCTGTGGCTAAGAAATCTTCTGG
GCCTGCCTGAGAAGGAGACGGTTTATTTGGATCTTCCAGATGAACAAGGTCAAAAATCCCCTCCAGTCAC
AGAGTCGAAGGTGACAAGTGGGAAAGCTGGGAAGGAGGATCGGAGAGGGGGCGCACAGGAGAAGAAACAA
CTGGGTACCAAAGACAAAGATGATAAAAGGGGTTCCAAGACACCAGGGAAAGAGGACCGCCCGAATAGCA
AAAAACTGAAACCAAAAGATGACAAGAAAGTGGTAAAGTCTGCAAGCCGGGACAGGCTACTCTCAGAAGA
TCCTCCCCCTGACAGCACGGCACCCTCCCAGGAGCCCATAGACCCCCTGGTCATGGAGAAATATACCCAG
CGGTTGCACGCTGAGGTCTATGCGTTGCTGGACAACCTGGTGACAGATGTGATGGTCCTGGCTGATGAGC
TCAGCTCTACAAAGAATGTTGAAGAGTCTTTACGTTTTTGCAGCTGATTCTTGGACCCAAGCTTCCTCCT
GGGAAGGTGGTTTGAAAAAAGTCAATAAAGAATCTTTAGGTTCCTAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3991131 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3991131 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003771 same experiment
 EMAGE:31260 same embryo
 EMAGE:31881 same embryo
 EMAGE:29424 same embryo
 EMAGE:31258 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS