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EMAGE:31337

1110049F12Rik ( MGI:1913443)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31337 EMAGE:31337 EMAGE:31337 EMAGE:31337 EMAGE:31337
euxassay_005109_01 euxassay_005109_02 euxassay_005109_03 euxassay_005109_04 euxassay_005109_05
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euxassay_005109_06 euxassay_005109_07 euxassay_005109_08 euxassay_005109_09 euxassay_005109_10
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euxassay_005109_11 euxassay_005109_12 euxassay_005109_13 euxassay_005109_14 euxassay_005109_15
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euxassay_005109_21 euxassay_005109_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 05 06 15 16
metanephros
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 12 13 14 15
cervico-thoracic ganglion
moderate moderate
regionalmoderate expression: see section 07 13
spinal cord
moderate moderate
regionalmoderate expression: see section 05 06 07 08 09 10 11
rectum
moderate moderate
regionalmoderate expression: see section 10
thoracic ganglion
moderate moderate
regionalmoderate expression: see section 10
lower jaw molar
moderate moderate
regionalmoderate expression: see section 07 08 09 17 18
upper jaw molar
moderate moderate
regionalmoderate expression: see section 07 08 09 17 18
thymus primordium
strong strong
regionalstrong expression: see section 09 10 11 12 13
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 05 06 07 15 16 17 18 19 20
nasal cavity respiratory epithelium
moderate moderate
regionalmoderate expression: see section 13 18
vibrissa
moderate moderate
regionalmoderate expression: see section 07 08 09 21 22
nasal cavity olfactory epithelium
moderate moderate
regionalmoderate expression: see section 09 10 11 12 13 14 15 16 17 18 19
respiratory tract
moderate moderate
regionalmoderate expression: see section 06
cervical ganglion
moderate moderate
regionalmoderate expression: see section 06 14
naris
moderate moderate
regionalmoderate expression: see section 13 18
orbito-sphenoid
moderate moderate
regionalmoderate expression: see section 05 21 weak expression: see section 03 04 20
cranial musculature
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
brain
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 05 15
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 05 06 07 13 weak expression: see section 11 12
adenohypophysis
moderate moderate
regionalmoderate expression: see section 13 weak expression: see section 09 10 11 12
submandibular gland primordium
moderate moderate
regionalmoderate expression: see section 06 07 08 15 16 17
liver
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
lower jaw incisor
moderate moderate
regionalmoderate expression: see section 11 12 13 15 16 17
upper jaw incisor
moderate moderate
regionalmoderate expression: see section 12 13 16 17
lung
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 07 08 09 10 11 12 13 14 15 16 17 18 19 20
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8577
Entity Detected:1110049F12Rik, ( MGI:1913443)
Sequence:sense strand is shown

>T8577
GGCGTCGCCATGTCGCACGGCCACAGCCACGGCGGGGGCGGCTGTCGCTGCGCCGCTGAGCGCGAGGAGC
CGCCCGAGCAGCGCGGCCTGGCCTACGGGCTGTACCTGCGCATCGACCTGGAGCGACTGCAGTGCCTCAA
CGAGAGCCGCGAGGGCAGCGGCCGCGGCGTCTTCAAGCCGTGGGAGGAGCGGACCGACCGCTCCAAGTTT
GTTGAAAGTGATGCGGACGAAGAGCTCCTGTTTAATATTCCGTTTACGGGCAATGTCAAGCTGAAAGGCG
TCATCATAATGGGCGAGGATGATGACTCGCACCCCTCGGAGATGAGACTGTACAAGAACATTCCACAGAT
GTCATTTGATGACACAGAAAGGGAGCCAGAGCAGACCTTCAGTCTGAACCGAGACATTACAGGAGAATTA
GAATATGCTACGAAAATCTCCAGGTTTTCAAATGTCTATCATCTTTCCATTCATATTTCAAAAAACTTTG
GAGCAGATACGACGAAGATCTTTTATATTGGCCTGCGGGGAGAGTGGACTGAGCTTCGCCGGCATGAGGT
GACCATCTGCAACTATGAAGCGTCAGCCAACCCAGCAGACCACCGGGTGCATCAGGTCACCCCGCAGACA
CACTTCATTTCTTAAGGGCCAGCCGGGGCTCCCTCAGATGCGCTGTTAGTGAAGATGTGCGACCACCTGC
TGGGAAGGACAGAGGATGCTCCAGCAAGAGTTGCCTGCCAGAGCTTTGGCCAGGCTTTGTCTCGGGGTTG
CTGCAGGAACCTGGCCTGTGGAAACCGCCTCACCACCAGGAGCGGTATGGGTGCCAAGGGATAGTCTCTC
TCTAAGGCACTGCAGAAACTGGGTCTTAGGCTGGGTGGCATCTGTCAGTCATGAATAATGCTCACTTCCC
AGTCTGTGGCCACGGGATCCCATGTGTCTTTTTGCTTGTGGCAGATTTCTTGTGTGGTTTGTCCTTTTTC
AAAAAGGATGCTTCCTTGACCGTAGGAATCCTTCTGAAACCCGAGTTTCGTGTTTGAATTAGCCATCAGG
AGGGTCTCCAGCTAGAAACACTTCGTCCCTGCTTGCTCCTCCTCCTGTCATTGCTCAGCATTCGTGTCAG
GGTGCCTAGCTGGTGTCACATATCAGACACAAGTGTCCCACAATGGTGGTTGGAAAGGAAGGAGTCTCCT
GATACATGACTGCTTGGGGAAGGTCTTACACAGTCTAGCCAAATAGTTGCGAGTCCTTTCCCTGTGTGGG
TGACCTGGTTGGGGTAAAACTGAGACAGTAAAGATTCCTCTTGGGACCTCCTTGGTGTTTCCCTGCTTCT
AACTCATGTTATAAACCCAGGGCTGGAGTCTGGAGACCCTGCTCCTTCTGTTCATGGCTTTCATTCATGG
TGACTAATGAGCTTCCTAATAAATCCTTAGAGACTTAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5715038 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5715038 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_005109 same experiment
 EMAGE:30946 same embryo
 EMAGE:30857 same embryo
 EMAGE:30866 same embryo
 EMAGE:30893 same embryo
 EMAGE:29224 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS