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EMAGE:31996

Ttc8 ( MGI:1923510)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31996 EMAGE:31996 EMAGE:31996 EMAGE:31996 EMAGE:31996
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
telencephalon ventricular layer
weak weak
homogeneousweak expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 14 15 16 17 18 19 20 21 22 23
nasal cavity olfactory epithelium
weak weak
regionalweak expression: see section 08 09 11 12 15 16 17
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4357
Entity Detected:Ttc8, ( MGI:1923510)
Sequence:sense strand is shown

>T4357
CCGGGCCGGGCTCTGGGTACAGGGCCTCTGGGTTCCTTGAGGGTTGTCCCGGACCACCATGGGCTCAGAG
ATGGAGCCACTGCTCCGGGCCTGGAGCTATTTTAGACGCAGGAAGTTCCAGCTCTGCGCCGATCTATGCA
CGCAGATGCTGGAGAAATCCCCTTATGATCAGGAACCAGCTCCTGATTTGCCAGTGTCTCAGGCGGCTTG
GATTTTGAAAGCACGGGCGCTGACAGAGATGGTGTACATAGATGAAATTGATGTGGACCAGGAAGGAATT
GCTGAAATGATCCTGGATGAAAATGCTATTGCTCAGGTCCCACGCCCTGGCACATCTTTGAAGCTCCCTG
GCACTAACCAAACAGGAGGACCGACTCAAGCTGTCAGGCCAATCACTCAAGCTGGAAGACCCATAACAGG
TTTCCTTAGGCCCAGCACACAGAGTGGAAGACCAGGTACAATGGAACAGGCCATCAGAACACCCAGAACT
GCCTACACAGCACGACCTATCACTAGCTCATCTGGAAGATTCGTCAGACTGGGGACTGCTTCCATGCTTA
CAAGTCCCGATGGACCATTTATAAATTTATCTAGACTGAATTTAACAAAATATTCCCAGAAGCCTAAGTT
GGCAAAGGCTCTATTTGAATATATTCTCCACCATGAAAACGATGTTAAGATGGCTTTGGATTTGGCGTCC
CTTTCCACGGAGTATTCTCAGTACAAGGACTGGTGGTGGAAGGTACAGATTGGAAAATGTTACTACAGGT
TAGGAATGTACCGTGAAGCAGAGAAACAGTTTAAATCAGCCTTGAAGCAGCAGGAAATGGTAGACACATT
TCTCTATCTGGCAAAAGTTTATATCATATTGGATCAACCTGTGACTGCTTTAAATCTATTTAAACAAGGC
TTAGATAAGTTTCCAGGAGAGGTGACCCTGCTTTGTGGAATTGCCAGGATCTATGAGGAAATGAATAACA
GTTCATCTGCAGCAGAGTACTACAAAGAAGTTCTAAAACAAGACAATACTCACGTGGAAGCCATCGCCTG
CATTGGAAGCAACCACTTTTATTCTGACCAGCCAGAGGTTGCCCTTCGGTTTTACAGGCGCCTCTTGCAG
ATGGGAGTTTATAACTGCCAGCTTTTCAACAACCTGGGCCTGTGCTGCTTCTATGCCCAGCAGTACGATA
TGACCCTGACCTCGTTTGAACGTGCCCTTTCCCTGGCTGAAAATGAAGAAGAGGCAGCTGATGTCTGGTA
CAACCTGGGGCACATAGCTGTGGGAATCGGAGATACAAACTTGGCCCACCAATGCTTCAGGCTGGCCCTG
GTCCACAACAACCACCATGCTGAAGCCTACAACAACCTGGCAGTGCTGGAGATGCGGAAGGGTCACGTTG
AACAGGCACGCGCGCTCTTACAAACCGCATCGTCTTTGGCACCCCACATGTATGAGCCACACTTTAATTT
CGCAACAGTCTCTGATAAGATTGGAGATCTTCAGAGAAGCTACGTTGCTGCTCAGAAGTCTGAAGTGGCG
TTTCCTGAACACGTGGACACACAGCACTTAATTAAGCAGCTGAAGCAGCACTTTGCTATGCTCTGATCAG
TGCTTGGGCCACATAAGCCTTCACGGAGGGCCAGCGCACAGGGAAGAAAACGCACTGAGTGCATTTGTAC
CAATACTGTGATGCAGACCTCATAAGGCATCCTACAAGACTGCAAACCCGAACCTGTTGTCTGAACTTTG
TTGTTTTATAAGGTAACACTAGAAAAACAGGACTTAAGCATTTCCTAGTTTTATCAATTAAAAAATTTAT
TGTTAGATACAGACATTTTCAAAGACATATGTCATATATGTTGGGTGCACTTCTGCCATGCTCTCCTCTC
CCATTAGTCCCCTTTGTCCCCTAGACACTTTCATGTCACCTGTATGGGCATGAGTTTAGGTATCTGACTA
AGATCTAGAAGCCGCAGATTAGAGAAGAAACACAATGTATATAGTTGTTAAACATTTTCATGAACCTCAA
TTTTTTTATAAATGTGTATTTTAAAACTTGTTAAGCAAAAAAAAAACTCTTTAATCATTAGCTGTCATTA
TAAACTTAGGAGGTCAGAAATCTGCTTTAAAATTTTTATTTTTATGGCTAATAATGTGTGCTTTTATCAC
AAATGCTTTAATTAGAACATGAAAATTTGTATTTTAAACTATTTTTATCATAAAGTTTGTATTATATATT
ACACTTTAAAATAAATCAGTATGTAAAACAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4527657 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4527657 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_001225 same experiment
 EMAGE:29627 same embryo
 EMAGE:31380 same embryo
 EMAGE:31377 same embryo
 EMAGE:29585 same embryo
 EMAGE:29610 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS