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EMAGE:7046

Srsf7 serine/arginine-rich splicing factor 7 ( MGI:1926232)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046
"Pseudo-wholemount" of euxassay_002576. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002576_01 euxassay_002576_02 euxassay_002576_03 euxassay_002576_04
EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046
euxassay_002576_05 euxassay_002576_06 euxassay_002576_07 euxassay_002576_08 euxassay_002576_09
EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046
euxassay_002576_10 euxassay_002576_11 euxassay_002576_12 euxassay_002576_13 euxassay_002576_14
EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046
euxassay_002576_15 euxassay_002576_16 euxassay_002576_17 euxassay_002576_18 euxassay_002576_19
EMAGE:7046 EMAGE:7046 EMAGE:7046 EMAGE:7046
euxassay_002576_20 euxassay_002576_21 euxassay_002576_22 euxassay_002576_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7046Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7046_wholemount_strong.wlz
7046_wholemount_moderate.wlz
7046_wholemount_weak.wlz
7046_wholemount_possible.wlz
7046_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7046_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5128
Entity Detected:Srsf7, serine/arginine-rich splicing factor 7 ( MGI:1926232)
Sequence:sense strand is shown

>T5128
CCACGCGTCCGGGCAGAGGAGGTTGCGCAGCCGCTTCCGTGCTACTCGCGCTGTGAGCATTCCAAGCTAG
AGCCGAGTACACGGGCCGGCCATCATGTCACGCTACGGGCGGTATGGAGGAGAAACCAAGGTATATGTTG
GTAACCTGGGAACTGGTGCTGGTAAAGGAGAGTTAGAAAGGGCATTCAGTTACTATGGGCCCTTAAGAAC
TGTGTGGATTGCCAGAAATCCTCCAGGATTCGCCTTTGTGGAATTTGAAGACCCTAGAGATGCAGAGGAT
GCAGTTCGAGGATTGGATGGGAAAGTGATTTGTGGTTCTCGAGTGAGGGTTGAACTATCAACAGGCATGC
CTCGGAGATCTCGTTTTGATAGGCCACCTGCCCGTCGTCCCTTTGATCCTAATGATAGATGCTATGAGTG
TGGTGAAAAGGGACATTATGCTTATGACTGTCATCGCTATAGCCGACGAAGAAGAAGCAGGTCACGATCT
AGATCCCATTCCCGATCCAGGGGAAGGCGATACTCTCGCTCCCGCAGCAGGAGCCGAGGACGGAGGTCAA
GATCAGCATCTCCTCGCCGATCAAGGTCTGTGTCTCTTCGTAGATCAAGATCAGCTTCACTCAGAAGATC
TAGGTCTGGTTCTATAATAGGATCGAGGTATTTCCAATCCCGCTCAAGGTCGAGATCAAGATCCAGGTCT
ATTTCACGACCAAGAAGCAGCCGATCAAAATCCAGATCTCCATCTCCTAAAAGAAGTCGTTCCCCATCAG
GAAGTCCACACAGAAGTGCAAGTCCAGAAAGAATGGACTGAAGTTCTCAAGTTCACCCGTTAGGGAAAAG
TTATTTTGTTTACATTATTATAAGGGATTTGTTATGTCTGTAAAGTGTAACCTAGGAAGGATCATCAACC
ATCTAATCAAAATGGATCTGGATTATTACTCTGTAAAATTCACAGCAGTAAATATTGTTTTGTTGAATGT
ATTAACATCTTATGGTCTGAAAATGTGGGTTTTTATTTGACACGTTTAAATAAAATGTTTCTAACTAGAT
GTTTTGATTTTTGTGTTCAATATTAATACTTTTCAATTGGGTAAGCATCAGGCAAGGTAACAATCAAGAG
AATTATTGGCCATATTTATATGGGCCTGTATTCAAAGTTTAATGGTGTTAGTTAAACATCATTAACTGTT
CTATACGTAACACTGGCCAGGATCTGAAAGGACTTTGAAATTTTCATTTTACTCTTGTACCTTTGGGTAA
GATGATCTTTGAGTCCTTAATAGCATGAGTGCATCATGTCAGATCTCTAAATTGAGAATTGGTGTTAACA
ATTTGGAATTGTCAAGCTTAGAGGGACCACTGATAAGCCTACAAATTGGTGCATGACAGAAAATAAGCAG
AGTTACTGACATGTCAGTAGAAACTGATTTCTAGCGGCTGAGATTTTAGTAGTGTAGTTTTTCAGGCTAT
TAAGTTGGGTTAATTCTGCTCAATGTACTTTTTTCCTTTCAAACAACCAATTTAATACCAAAAAATGCAT
GTTTGAGGAATTGTCTGAATTTGGAACAAAACCTTGTAAACCAGCTTTGCAAAATTATCCAGCCCCAGTC
CTCTGTTCTTTTGAATGGATTGCCTTATCCTGTGCAAAAACCTGTTAATATCTGAGCTAGATTTTGTATG
AAGCTATGTGTAATTGGCAGACTTATCTGTTGCACTTGGTTAGCTTGGTTACTGACATTGTTCTATTTTG
CCAAGCTGGTATAAAGAGATGTCAAGCAAAGTGTTAATAAGATAAAGCAGTTTTGTAAACCTTACATATT
AGCATTTCATGTAGCTAAGGATTGTTATGTTTTTGTTTTGGGTTTTTCCTCCTTTGGTAGTGTCTGGTAG
ACCTTAGAATGGTGTAGCCAGTAGGTTCTTACTCAGACTTTAAATATATTATGCATAATAGGGCAGTAAT
GGTCATTTTCAAACGTTTTTTGGACAAGCTTTTTACTATATTTCTTAGCCTTGGTGTAAAAACAATAGCA
CAGGAATCTGTCCTTGTCTATTTTAGGCTTTTTCATCGAAGTTGTCTGCCCCAAATTTATTTGGCTGAGT
GGTCACTAGTATGTTGAAAGTCATTTGGGTTCTGTTTTTAGAATTTGACTGGTTGAATAAGTGGTTGGTA
TGAAGCTATGTGTAATTGGCAGACTTATCTGTTGCACTTGGTTAGCTTTAATTGTTCTGTATTCAAAAAT
TAAGTTTGTTCAATAAATCTGCAGAGATTGAACAAATAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5342587 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5342587 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7043 same embryo
 EMAGE:7045 same embryo
 EMAGE:7042 same embryo
 EMAGE:7047 same embryo
 EMAGE:7044 same embryo
 EurExpress:euxassay_002576 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS