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EMAGE:7119

Gabrr2 gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 ( MGI:95626)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7119
euxassay_002622_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7119Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7119_wholemount_moderate.wlz
7119_wholemount_weak.wlz
7119_wholemount_possible.wlz
7119_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7119_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5245
Entity Detected:Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 ( MGI:95626)
Sequence:sense strand is shown

>T5245
TGCCCTTACAGCCTCTCAGAGAAGCGCTGACCAGAGGCTGGAGGCAGGCTCCATGGTTAAGCCAGGGGGC
ATCTTGCCCATTAAAAGTCCCTGCACAGCTGCCTGTTGCATCATAGACATGTGCAGAATGCCTTATTTGA
TGAGACTCGCTTTGGTCTTGTTTTGCCTGATGGCTCTCGTGGAGAGCAGAAAGCCCAGGAGGAAGAGATG
GACAGGGCTTCTGGAAACATCCAAGCCAAGCCATTTGTATAAAAAGAACCTTGATGTGACCAAGATGCGG
CCAGGAAAGCCTCGGCCTCTGCTCAGGGTAGAGGACCACGACTTCACCATGAGGCCAGCCTTTGGAGGCC
CCGCCATCCCTGTAGGTGTGGACGTGCAGGTGGAGAGTCTGGACAGCATCTCCGAGGTGGACATGGACTT
CACCATGACCCTATACCTGAGGCATTACTGGAGGGACGAGAGGCTGGCCTTCCCCAGCAGCAGCAACAAG
AGCATGACCTTTGATGGCCGGCTGGTGAAGAAGATCTGGGTTCCTGATGTCTTCTTTGTGCACTCCAAAC
GCTCCTTCATCCACGACACCACCACCGACAACATCATGCTGCGAGTGTTCCCCGATGGCCATGTGCTATA
CAGCATGAGGATTACGGTCACTGCCATGTGCAACATGGACTTCAGCCACTTTCCCCTGGATTCCCAGACC
TGCTCTTTGGAGCTGGAGAGCTATGCGTACACAGATGAAGATCTGATGCTGTACTGGAAGAACGGGGACG
AGTCCCTGAAGACAGACGAGAAGATCTCCTTGTCCCAGTTTCTGATCCAGAAGTTTCACACGACTTCCAG
ACTGGCCTTCTACAGCAGCACTGGCTGGTACAACCGTCTGTACATCAACTTCACTCTGCGTCGTCACATC
TTCTTCTTCTTGCTCCAAACCTACTTCCCTGCCACCCTCATGGTCATGCTGTCCTGGGTGTCCTTCTGGA
TCGACCACAGAGCCGTGCCCGCCAGAGTCTCACTGGGCATCATGACGGTGCTGACCATGTCGACCATCAT
CACGGGTGTGAACGCCTCCATGCCCCGAGTGTCCTACATCCGGGCCGTGGACATCTACCTCTGGGTCAGC
TTTGTGTTCGTCTTCCTCTCCGTGCTGGAGTACGCAGCTGTCAACTACCTGACCACACTGCAGGAGCAGA
AGGAACGGAAGTTCCGGGAGAAGCTTCCATGCATGTGTGGAATGCTTCATTCAAGGACCATGATGCTGGA
TGGAAGCTACAGTGAATCTGAGGCCAACAGCCTGGCTGGCTACCCAAGAAGCCACATTCTGCCAGAAGAA
GAAAGGCCAGATAACATCGTGGTTCATTTGGCCCTCAACAGTGAATTGACCTCCTCCAGAAAGAAAGGCC
TTCTGAAAGGCCAAATGGGTCTCTACATCTTCCAGAACACCCATGCCATTGACAAATACTCCAGGTTGAT
ATTTCCTGCCTTCTACATAGTTTTCAACCTAATTTATTGGTCAGTGTTTTCCTAGGGATTCTAAGGCTGT
GTCTGTGAAAGGGCATGGACATCCACTGGTGGATACATGGACCTAATGACCACACTCCACACCAGGCCAA
GCAGCTGCTTCTGGCCTGGAGGAGCCTGGGGACCTCCAGCTGCCCTCACCCCATCTTCATGGCTCTTTTC
CTATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTGTCTTCTGCTGTTTGTGAA
CTTGTTCACAAGAATCCCCCCTTTCCCCACCTACTTAATAAAAGACTCAACTGCCAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5357713 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5357713 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7117 same embryo
 EMAGE:7120 same embryo
 EMAGE:7116 same embryo
 EMAGE:7115 same embryo
 EMAGE:7118 same embryo
 EurExpress:euxassay_002622 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS