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EMAGE:7297

Cox7a2l cytochrome c oxidase subunit VIIa polypeptide 2-like ( MGI:106015)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297
"Pseudo-wholemount" of euxassay_004385. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004385_01 euxassay_004385_02 euxassay_004385_03 euxassay_004385_04
EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297
euxassay_004385_05 euxassay_004385_06 euxassay_004385_07 euxassay_004385_08 euxassay_004385_09
EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297
euxassay_004385_10 euxassay_004385_11 euxassay_004385_12 euxassay_004385_13 euxassay_004385_14
EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297
euxassay_004385_15 euxassay_004385_16 euxassay_004385_17 euxassay_004385_18 euxassay_004385_19
EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297 EMAGE:7297
euxassay_004385_20 euxassay_004385_21 euxassay_004385_22 euxassay_004385_23 euxassay_004385_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7297Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7297_wholemount_strong.wlz
7297_wholemount_moderate.wlz
7297_wholemount_weak.wlz
7297_wholemount_possible.wlz
7297_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7297_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6393
Entity Detected:Cox7a2l, cytochrome c oxidase subunit VIIa polypeptide 2-like ( MGI:106015)
Sequence:sense strand is shown

>T6393
TGCGAAGCCGGCCTCCGCCAACATGTACTACAAGTTTAGCAGTTTCACGCAGAAGTTGGCTGGAGCTTGG
GCTTCGGAAGCCTACACCCCGCAGGGGTTAAAGCCAGTTTCCACAGAAGCACCACCTATCATATTTGCCA
CACCAACCAAACTGACCTCCAGTGTGACAGCATATGATTATTCTGGGAAGAACAAAGTTCCAGAGCTGCA
GAAGTTTTTCCAGAAGGCTGATGGTGTGCCCATCCACCTGAAACGAGGCCTTCCAGACCAAATGCTTTAC
CGGACCACCATGGCTCTGACACTGGGAGGGACCATCTACTGCCTGATCGCCCTCTACATGGCCTCGCAGC
CCAGAAACAAATGAGCTTGCCTGTGGAGGACTGGTTCACTTTGTGGCACAAACCCTTTGAATCCTCACGT
TTCATGTTTTCCACTTGGATAGTCTACTTAACATTTTGCAAACAAAGGAAAAGATAAGAATACATTGTTT
TGATTTGTTTATGGTGTGCAGATGGCCTGTCAGATGTCAGAGCTGGTTTGACAGTTAAAACTATTGTTTA
AGGAAATGTCACTGAGCCATCACTGAGCTGTGCTTCTGCTCCTGATTTCCCTGGAGTTCTGCAGGAAAGT
TGCTCTCCAGCTCATTCGTGGCCAGCCGTGCTCAGGGCCTCGGGACTCAGGCGGTGTCTGAGCGGGAAGC
GAAGCGCCCGAAGCCTTTTGGAGTGTAGGTGTGATTGAGGAAGGAAAACAAAAGCCAGCGGACAGGTGGT
GAAGTGAGGGCTGAGTTAGCCACCCTAGGGATTGCTCCGCCTTGCAGAAAACATTGAGAGGAATGATAGC
AACCTGCCTCTATTTGTGGGCAGTTGGTTTCAAAGGGTTGTGTGTCTCGCCCAGAACCTAGGGAAATGGG
TGTTTGTTCCATCGTGGGAGGAGCACCTGTCAGTGCTGCACATTAGACAGCTGTGTCAGGAGTTCTCCTT
TAATAATGCTGTGGCTTTACGTTATGATTGACCGGACTGCGGAATAAACACTGGAATGAAAAAAAAAAAA
AAA
Notes:The probe template was PCR amplified from IMAGE:3582142 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3582142 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7295 same embryo
 EMAGE:7292 same embryo
 EMAGE:7296 same embryo
 EMAGE:7293 same embryo
 EMAGE:7294 same embryo
 EurExpress:euxassay_004385 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS