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EMAGE:7806

Cryzl1 crystallin, zeta (quinone reductase)-like 1 ( MGI:1913859)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806
"Pseudo-wholemount" of euxassay_005324. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005324_01 euxassay_005324_02 euxassay_005324_03 euxassay_005324_04
EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806
euxassay_005324_05 euxassay_005324_06 euxassay_005324_07 euxassay_005324_08 euxassay_005324_09
EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806
euxassay_005324_10 euxassay_005324_11 euxassay_005324_12 euxassay_005324_13 euxassay_005324_14
EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806
euxassay_005324_15 euxassay_005324_16 euxassay_005324_17 euxassay_005324_18 euxassay_005324_19
EMAGE:7806 EMAGE:7806 EMAGE:7806 EMAGE:7806
euxassay_005324_20 euxassay_005324_21 euxassay_005324_22 euxassay_005324_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7806Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7806_wholemount_strong.wlz
7806_wholemount_moderate.wlz
7806_wholemount_weak.wlz
7806_wholemount_possible.wlz
7806_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7806_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6902
Entity Detected:Cryzl1, crystallin, zeta (quinone reductase)-like 1 ( MGI:1913859)
Sequence:sense strand is shown

>T6902
GCGGCGGCGAAGGCGCTGGCGGTTGAGGTTGCTCCGAGCCAGGTAACTATGAAAGGCTTGTATTTTCAAC
AGAGTTCTACAAATGAAGAAGTAACATTTGTATTTCAAGAAAAGGAAAATGTCCCTGTCACAGAGGATAA
CTTTGTGAGAGTTCAAGTTAAAGCTTGTGCCCTGAGCCACATAAACACAAAGCTTCTAGCAGAAATGAAG
ATGGAAAAGGATTTCTTCCCTGTTGGAAGAGAAGTTTCTGGAATTGTATTAGAGGTTGGCAGGAAGGTAA
CGTTCTTTCAGCCAGACGACGAAGTGGTCGGAATTCTGCCTTTGGATTCCGAAGACCCCGGGCTCTGTGA
GGTTATTCGAGTACATGAGCATTACCTGGTTCATAAGCCAGAAAAGGTGTCATGGACGGAAGCTGCTGGC
GTCATCCGGGACGGAGTCCGAGCCTGCACAGCTCTGTATTATCTTTCTCAACTCTCTCCTGGAAAGTCTG
TGCTGATCATGGACGGGGCAAGTGCATTTGGCACAATAGCCATTCAGTTAGCCCACCACAGAGGAGCCAA
GGTTATCTCAACAGCACACAGCCTGGAGGACAAGCAACATCTTGAAAGGCTTAGGCCTTCTATAGCCCGT
GTGATTGATGTGTCTAATGGGAAAGTCCATGTTGCTGAAAGCTGTTTGGAGGAAACAGGTGGCCTGGGAG
TAGATATTGTCATAGATGCAGGAGTGAGATTATATAGTAAAGATGATGAACCAGCTGTAAAGTTACATCT
GCCACATAAGCATGACATCATCACACTTCTTGGTGTCGGAGGCCATTGGGTAACAACAGAAGAAAACCTT
CAGTTGGATCCTCCAGATAGCCACTGCCTTTTCCTCAAGGGAGCAACGGTGGCTTTCCTTAATGATGAAG
TTTGGAATTTGTCAAATGCACAACAGGGAAAATATCTTTGTATCTTAAAAGATGTGATGGAGAAGTTATC
AGCTGGTGTTTTCAGGCCTCTGCTCGATGAGCCCATCCCACTGTATGAGGCAAAGGTTTCCATGGAAGTT
GTTCAGAAAAATCAAGAAAGAAAAAAGCAAGTCGTTCAATTTTAATTCTCTTCCCTGATCTCAGTCGGAT
GCACCCACACCAGTGGGGGAAGCCAGTTTTCTTTGGAAATTGTTGAGAAAAACCAAGGACGATAAAGCAA
GATTTTATATTTTTAAGCCTGTTTTCCTGCCACAGTAAGATGTTTGGTTATTTGACATATTTGAAAAATA
CTTCCAAAATTAATGTGCAAACAATCCAGATAATTTTTTTACCATCTGAAGGGGACATTCCAAAAGCTTC
TTTTAGTTATTGTATCTGTACACTTTGCCTCTGCTATAAAATTCTTTCCATTAAGAAAACTGCTTTCAGC
AAAAGCTACACTATTCTAGCAAATACATCTGTCACATGCTTTTGCTATACCAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3968727 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3968727 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7805 same embryo
 EMAGE:7803 same embryo
 EMAGE:7804 same embryo
 EurExpress:euxassay_005324 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS