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EMAGE:10248

Atp7a ATPase, Cu++ transporting, alpha polypeptide ( MGI:99400)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248
"Pseudo-wholemount" of euxassay_018904. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018904_01 euxassay_018904_02 euxassay_018904_03 euxassay_018904_04
EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248
euxassay_018904_05 euxassay_018904_06 euxassay_018904_07 euxassay_018904_08 euxassay_018904_09
EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248
euxassay_018904_10 euxassay_018904_11 euxassay_018904_12 euxassay_018904_13 euxassay_018904_14
EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248
euxassay_018904_15 euxassay_018904_16 euxassay_018904_17 euxassay_018904_18 euxassay_018904_19
EMAGE:10248 EMAGE:10248 EMAGE:10248 EMAGE:10248
euxassay_018904_20 euxassay_018904_21 euxassay_018904_22 euxassay_018904_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10248Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10248_wholemount_strong.wlz
10248_wholemount_moderate.wlz
10248_wholemount_weak.wlz
10248_wholemount_possible.wlz
10248_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10248_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50129
Entity Detected:Atp7a, ATPase, Cu++ transporting, alpha polypeptide ( MGI:99400)
Sequence:sense strand is shown

>T50129
TCCGGACCATTGAACAGCAGATTGGGAAAGTGAATGGTGTCCATCACATTAAAGTTTCACTAGACGAAAA
GAGTGCAACCATTATTTATGACCCTAAACTTCAGACTCCAAAGACCCTCCAAGAAGCTATCGATGACATG
GGCTTTGATGCTCTTCTCCACAATGCTAACCCCCTCCCTGTCTTAACCAATACCGTGTTCCTGACTGTTA
CTGCTCCACTGACTCTGCCTTGGGACCATGTCCAAAGTACATTGCTCAAGACCAAGGGTGTGACTGGTGT
TAAGATTTCCCCTCAGCAAAGAAGTGCAGTAGTCACCATAATTCCATCTGTGGTGAGTGCCAGTCAGATT
GTGGAGCTGGTCCCAGACCTCAGTTTAGACATGGGAACTCAGGAGAAAAAGTCAGGAGCTTGTGAAGAGC
ACAGCACGCCTCAGGCAGGGGAAGTCAGGCTGAAGATGAAAGTGGAAGGGATGACCTGCCATTCATGTAC
TAGCACCATTGAAGGAAAAGTTGGAAAGCTGCAAGGTGTTCAGCGCATTAAAGTGTCCCTAGACAACCAA
GAAGCTACTATTGTTTTTCAACCTCATCTCATCACAGCAGAGGAAATAAAGAAGCAGATTGAAGCCGTGG
GTTTCCCAGCCTTCATAAAAAAGCAGCCGAAGTACCTCAAATTGGGAGCCATTGATGTTGAGCGCCTGAA
GAACACACCGGTCAAATCTTCAGAAGGATCTCAGCAAAAGAGCCCATCATATCCCAGTGACTCCACAACC
ATGTTCACCATAGAGGGCATGCATTGTAAATCGTGTGTGTCCAATATTGAAAGTGCTTTATCTACACTCC
AGTATGTAAGCAGTATAGTAGTTTCTTTAGAGAATAGGTCAGCCATTGTAAAGTACAATGCAAGCTTAGT
CACTCCAGAAATGCTGAGAAAGGCA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:TCCGGACCATTGAACAGCAG; Reverse Primer - name:unspecified, sequence:TGCCTTTCTCAGCATTTCTG. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10252 same embryo
 EMAGE:10251 same embryo
 EMAGE:10247 same embryo
 EMAGE:10250 same embryo
 EMAGE:10249 same embryo
 EurExpress:euxassay_018904 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS