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EMAGE:10779

Fktn fukutin ( MGI:2179507)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779
"Pseudo-wholemount" of euxassay_002948. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002948_01 euxassay_002948_02 euxassay_002948_03 euxassay_002948_04
EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779
euxassay_002948_05 euxassay_002948_06 euxassay_002948_07 euxassay_002948_08 euxassay_002948_09
EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779
euxassay_002948_10 euxassay_002948_11 euxassay_002948_12 euxassay_002948_13 euxassay_002948_14
EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779
euxassay_002948_15 euxassay_002948_16 euxassay_002948_17 euxassay_002948_18 euxassay_002948_19
EMAGE:10779 EMAGE:10779 EMAGE:10779 EMAGE:10779
euxassay_002948_20 euxassay_002948_21 euxassay_002948_22 euxassay_002948_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10779Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10779_wholemount_strong.wlz
10779_wholemount_moderate.wlz
10779_wholemount_weak.wlz
10779_wholemount_possible.wlz
10779_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10779_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4298
Entity Detected:Fktn, fukutin ( MGI:2179507)
Sequence:sense strand is shown

>T4298
GCGAGGCCTCCGCCGCAGCTCTAGAGTTAGAAGTATCTCTGGTCACAGGAAACAAGATTCTGTTTCATGA
AGAAGATGAAAACAACTGGGCTACTGTTAAAAACCACCCAAGAGAACACCATAGACCAATGAGTAGAATC
AATAAGAACGTGGTCTTGGCCCTTTTAACATTGACGAGTTCTGCCTTTCTGCTGTTTCAGCTGTACTACT
ACAAGCACTATTTGTCTGCAAGGAATGGACTGGGTTCATCAAAATCCAAAGGGAATCGAGTTGGATTTGA
TAGCACACAGTGGCGTGCAGTTAAGAAATTTATTATGCTGACATCCAGCCAAAATGTGCCAGTGTTCCTT
ATTGACCCATGGATTCTGGAATCAATTAATAAAAACTTCGAACAAGTGAAAAATGCTTCTCAAGGCCCGG
CTTCAGAATGCAGATTTTTCTGTGTTCCGAGAGACTTCACTGCGTTCGCACTGCAGTATCACCTGTGGAA
GAATGAGGATGGCTGGTTTCGGATAGCTGAGAATATGGGGTTTCAATGCCTAAAGACTGAAAGCAAGGAT
CCTCGGCTAGATGGAATAGACTCACTTTCTGGGACTGAAATCCCTCTGCACTACGTCTGTAAGCTGACCA
CTCATGCCATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCATGGTCACCTACGACT
CAAAGGACACATGGATAGGAAGTTTGTTCCTTTTCGAAAGTTACAGTTTGGTCGTTATCCTGGAGCCTTT
GACAGGCCAGAGTTACAGCAAGTTACTGTTGATGGACTAGATATGCTTATTCCGAAAGACCCAGGGCGCT
TTCTAGAAGAAGTACCTCACTCCAGATTTATCGAGTGCAGGTATAAGGAAGCTCGGGCGTTCCTCCAGCA
GTACATTGATGATAATACTGTGGATGCTATGGTCTTTCGAAAGAGGGCAAAGGAGTTACTGCAACTAGCA
GCCAAGACGCTGAAGGACCTGGGAGTGCCCTTCTGGCTGAGCAGTGGGACTTGTCTAGGATGGTATCGGC
AGTGCGGTATTATTCCTTACAGCAAAGATGTCGACTTAGGGATTTTTATACAAGATTACAAACCTGATAT
TATTTTGGCATTTCAGGAAGCAGGACTTCCACTCAAACACAAGTTTGGGAAGGTGGAAGACAGCTTGGAA
CTATCCTTCCAGGGGAAAAATGATGTAAAACTTGATATTTTTTTCTTCTATGAAGAGGCTGACCATCTGT
GGAATGGAGGCACGCAGGCCAGAACGGGAAAAAAGTTTAAGTATCTGTTTCCCAAGTTTACACTGTGCTG
GACTGAGTTTGTAGACATCAAAGTGCATGTTCCCTGTGAAACGGTTGACTACATTGAAGCCAACTATGGT
AAGACCTGGAAGATTCCTATCAAGACATGGGACTGGAAGAGCTCACCCCCGAATGTGCAGCCCAATGGCA
TCTGGCCTATTTCGGAGTGGGATGAGGTTATCCAGTTGTACTGAGAAAACTAAGCTCAGGTGGCACATTT
CCCAGAAAGAAGGCGGGTAACTGTTTAAAGCACTACTGGTTTTTTGCCTGATGTGAGAGCCAAAGAAGAG
AAATGACAAGTTAGAAGACAGAAAAGGTTTTCTGATTCATGGGCCATCTAATTAGTTCTGCCATTCAGCA
TTTCCTGAGGAGTTGATGCACCAGGTGGAATACGAGGAGCTGGTGAATGAGCGAATGCCAGCCTCTCTTG
TCCTGTTGGTAAGCACTACAGTTTTCTTTTGAAAGAAACTTACTCACCCTCTGAAGAGCTGGTACACGAT
ATGATGTATTCCATCATAATTTTTAAAATGTTAATTAATCTTTATGCTGGAAAGTGAGCTCATCGGATGA
AGCTTACAAAGGATATGTTAGTTAAGAATAATTCACTCCTGCCTGTCCTCAGGATTTTTAGTGCTGCTTT
TAAGGTTGTAGAACATGAGTTAATATTCCAGTGAGTGATTAGACTTTGTCTCACAGAGAAAAGATGGTAG
CAAACTCATTTTATAAGCAGTGTGGTACACAGTTGGCTTCAAGCACAGGGGGTTCTATAAGGGAAGATGA
GAGCCCATATCAGCTATTGTCAAGACATACACTGTTCTCATATCTGAAGTGGACAGTGGGTGCTTAGATG
ATGCTTGAATGCCTGACATCATAGGATATTTTCCCTGACCTGCAGTGGTACTTGCTGATAAATCATCCAG
TCATGCTATCCGAAAGGTGTGACATCCCAAAGCTTACTTTCCTTATTTCATTTTCAATCATTCTTAGATT
TAAAAATGGAAGTTATTCATGAATATTTTTATATTTTATGAATGTATAACTCTTCTGCCCTTAATTTTAA
TATTCACACTAAATACTAATAGACATACCTCTGAATTTTTAAAAAAATACTCTTTATTTATTTATCAACC
ATAGCTCCATGTTTAATTTATGGCCTACATAATAATTTATTTAGCATAAAGATATGACTGTTCTTCTATT
CCAATATTACTTCAAGTTTCCAAAATGGAAGGTTAACATGAACCTGGAAACTATTCCTTTTTCCAGATCA
CTGTCTTTAAAGCCTGTGTCCATCTCTAGATTTTTCATTCTGCTGTGTGTAAGAGGGCAAGGACTTCCTA
CTGCCAAGTACTGCACATGTGGGACCCCTTGATTTTCTTTTTCTTCTCAAAATACACCCATGAGTAGGTT
GGGGTAGCTGTGCACTCTCAGTGAGAGATGACACAGTGAATGCCTGTCTTCCTGGCCTGGAAGGGGAGGG
GCTCTGCTCCCTGCTGCTTAGGGATGTGCTTCAGGGCCGCCCTGCAGATCTCCCTTGGAATGTGTAGTCA
CTAAAACGAACAAGAGTAGCTGAGGGAATGGGCTGGCAGAAAGTAAAAGAAGGAAAGAAAAAGAAAAACT
TGGAGCCGGGTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGG
TCTACAAAGTGAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTTTCTCGAAAAAACAACAACAACA
ACAACAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4506804 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4506804 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10778 same embryo
 EMAGE:10775 same embryo
 EMAGE:10776 same embryo
 EMAGE:10777 same embryo
 EurExpress:euxassay_002948 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS