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EMAGE:10814

Icam2 intercellular adhesion molecule 2 ( MGI:96394)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814
"Pseudo-wholemount" of euxassay_003083. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003083_01 euxassay_003083_02 euxassay_003083_03 euxassay_003083_04
EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814
euxassay_003083_05 euxassay_003083_06 euxassay_003083_07 euxassay_003083_08 euxassay_003083_09
EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814
euxassay_003083_10 euxassay_003083_11 euxassay_003083_12 euxassay_003083_13 euxassay_003083_14
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euxassay_003083_15 euxassay_003083_16 euxassay_003083_17 euxassay_003083_18 euxassay_003083_19
EMAGE:10814 EMAGE:10814 EMAGE:10814 EMAGE:10814
euxassay_003083_20 euxassay_003083_21 euxassay_003083_22 euxassay_003083_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10814Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10814_wholemount_strong.wlz
10814_wholemount_moderate.wlz
10814_wholemount_weak.wlz
10814_wholemount_possible.wlz
10814_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10814_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4183
Entity Detected:Icam2, intercellular adhesion molecule 2 ( MGI:96394)
Sequence:sense strand is shown

>T4183
CCACGCGTCCGCCGACCTGTAGCAGACATCTCTCCCTAACCCTCCAGGCAGCCGTCAGCTGTGCCCCTGA
AGCCCATAGACTCCACAGACCCCACAGACCCCACCTGAGATGTCTTCTTTTGCTTGCTGGAGCCTGTCTC
TTCTTATCCTGTTCTACAGCCCAGGGTCTGGTGAGAAGGCCTTTGAGGTCTACATATGGTCCGAGAAGCA
GATAGTAGAAGCCACAGAGTCTTGGAAAATCAACTGCAGCACCAACTGCGCAGCCCCAGACATGGGCGGC
CTGGAGACGCCCACGAATAAAATAATGTTGGAAGAGCATCCTCAAGGGAAGTGGAAACAGTTCTTAGTCT
CAAACGTCTCCAAAGACACGGTCTTCTTTTGCCATTTCACGTGTTCGGGAAAGCAGCACTCGGAGAGTCT
CAACATCAGGGTGTACCAGCCTCCAGCTCAAGTCACACTGAAGCTGCAGCCGCCTCGGGTGTTTGTGGGT
GAAGACTTCACCATTGAGTGCACGGTGTCCCCTGTGCAGCCCCTTGAGAGGCTCACCCTCTCTCTGCTCC
GTGGCAGAGAGACCCTGAAGAATCAGACCTTTGGGGGAGCAGAAACTGTCCCCCAAGAGGCCACAGCCAC
GTTCAACAGCACAGCTCTGAAAAAGGACGGTCTCAACTTTTCCTGCCAGGCTGAGCTGGATCTACGGCCC
CATGGTGGGTATATCATCCGCAGCATCTCGGAGTACCAGATCCTTGAAGTCTATGAGCCGATGCAGGACA
ACCAAATGGTCATCATCATCGTGGTGGTGTCAATACTGCTGTTCTTATTTGTGACATCTGTCCTGCTATG
CTTTATCTTTGGCCAGCACTGGCACAGAAGACGGACAGGCACCTACGGGGTGCTAGCTGCCTGGAGGAGG
CTGCCCCGAGCCTTTCGGGCACGTCCCGTGTGAGCCCACGTTGCCAGGCCCCTGGTGGTTACCAGAACTC
AACATGGCACCTTCAAGGTGTGGTTCGGCACTGGCTGAAGGACTGTGGCGGCAGCAGCAGATGCGGGGGA
CATTTCCTCTCCTTTTTAGCCTCAATACAAATATCTGGATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4487248 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4487248 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10815 same embryo
 EMAGE:10817 same embryo
 EMAGE:10816 same embryo
 EMAGE:10813 same embryo
 EurExpress:euxassay_003083 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS