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EMAGE:11098

Myog myogenin ( MGI:97276)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098
"Pseudo-wholemount" of euxassay_003544. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003544_01 euxassay_003544_02 euxassay_003544_03 euxassay_003544_04
EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098
euxassay_003544_05 euxassay_003544_06 euxassay_003544_07 euxassay_003544_08 euxassay_003544_09
EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098
euxassay_003544_10 euxassay_003544_11 euxassay_003544_12 euxassay_003544_13 euxassay_003544_14
EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098
euxassay_003544_15 euxassay_003544_16 euxassay_003544_17 euxassay_003544_18 euxassay_003544_19
EMAGE:11098 EMAGE:11098 EMAGE:11098 EMAGE:11098
euxassay_003544_20 euxassay_003544_21 euxassay_003544_22 euxassay_003544_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11098Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11098_wholemount_strong.wlz
11098_wholemount_moderate.wlz
11098_wholemount_weak.wlz
11098_wholemount_possible.wlz
11098_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11098_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7933
Entity Detected:Myog, myogenin ( MGI:97276)
Sequence:sense strand is shown

>T7933
CAGCAGTTGGCGTGAGGGGCTGCGGGAGCTTGGGGGCCAGTGGCAGGAACAAGCCTTTTCCGACCTGATG
GAGCTGTATGAGACATCCCCCTATTTCTACCAGGAGCCCCACTTCTATGATGGGGAAAACTACCTTCCTG
TCCACCTTCAGGGCTTCGAGCCCCCGGGCTATGAGCGGACTGAGCTCAGCTTAAGCCCGGAAGCCCGAGG
GCCCCTGGAAGAAAAGGGACTGGGGACCCCTGAGCATTGTCCAGGCCAGTGCCTGCCGTGGGCATGTAAG
GTGTGTAAGAGGAAGTCTGTGTCGGTGGACCGGAGGAGGGCAGCCACACTGAGGGAGAAGCGCAGGCTCA
AGAAAGTGAATGAGGCCTTCGAGGCCCTGAAGAGGAGCACCCTGCTCAACCCCAACCAGCGGCTGCCTAA
AGTGGAGATCCTGCGCAGCGCCATCCAGTACATTGAGCGCCTACAGGCCTTGCTCAGCTCCCTCAACCAG
GAGGAGCGCGATCTCCGCTACAGAGGCGGGGGCGGGCCCCAGCCCATGGTGCCCAGTGAATGCAACTCCC
ACAGCGCCTCCTGCAGTCCGGAGTGGGGCAATGCACTGGAGTTCGGTCCCAACCCAGGAGATCATTTGCT
CGCGGCTGACCCTACAGACGCCCACAATCTGCACTCCCTTACGTCCATCGTGGACAGCATCACGGTGGAG
GATATGTCTGTTGCCTTCCCAGACGAAACCATGCCCAACTGAGATTGTCTGTCAGGCTGGGTGTGCATGT
GAGCCCCCAAGTTGGTGTCAAAAGCCATCACTTCTGTAGCAGGGGGCTTTTAAGTGGGGCTGTCCTGATG
TCCAGAAAACAGCCCTGGGCTGCCACAAGCCAGACTCCCCACTCCCCATTCACATAAGGCTAACACCCAG
CCCAGCGAGGGAATTTAGCTGACTCCTTAAAGCAGAGAGCATCCTCTTCTGAGGAGAGAAAGATGGAGTC
CAGAGAGCCCCCTTGTTAATGTCCCTCAGTGGGGCAAACTCAGGAGCTTCTTTTTTGTTTATCATAATAT
GCCTCGAATTCCACCCCCCACCCCCAAAATGAAACCGTTTGAGAGACATGAGTGCCCTGACCTGGACAAG
TGTGCACATCTGTTCTAGTCTCTTCCTGAAGCCAGTGGCTGGGCTGGGCCTGCCCTGAGTTGAGAGAGAA
GGGGGAGGAGCTATCCGGTTCCAAAGCCTCTGGGGGCCAAGCATTTGCAGTGGATCTTGGGAACCTTCCA
GTGCTTTGTGTATTGTTTATTGTTTTGTGTGTTGTTTGTAAAGCTGCCGTCTGACCAAGGTCTCCTGTGC
TGATGATACCGGGAACAGGCAGGGAAGGGGGTGGGGGCTCTTGGGGTGACTTCTTTTGTTAACTAAGCAT
TGTGTGGTTTTGCCAATTTTTTTTCTTTTGTAATTCTTTTGCTAACTTATTTGGATTTCCTTTTTTAAAA
AATGAATAAAGACTGGTTGCTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6516364 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6516364 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11097 same embryo
 EMAGE:11095 same embryo
 EMAGE:11096 same embryo
 EMAGE:11094 same embryo
 EurExpress:euxassay_003544 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS