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EMAGE:12667

Pigx phosphatidylinositol glycan anchor biosynthesis, class X ( MGI:1919334)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667
"Pseudo-wholemount" of euxassay_011460. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_011460_01 euxassay_011460_02 euxassay_011460_03 euxassay_011460_04
EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667
euxassay_011460_05 euxassay_011460_06 euxassay_011460_07 euxassay_011460_08 euxassay_011460_09
EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667
euxassay_011460_10 euxassay_011460_11 euxassay_011460_12 euxassay_011460_13 euxassay_011460_14
EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667 EMAGE:12667
euxassay_011460_15 euxassay_011460_16 euxassay_011460_17 euxassay_011460_18 euxassay_011460_19
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euxassay_011460_20 euxassay_011460_21 euxassay_011460_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:12667Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
12667_wholemount_strong.wlz
12667_wholemount_moderate.wlz
12667_wholemount_weak.wlz
12667_wholemount_possible.wlz
12667_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:12667_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T30183
Entity Detected:Pigx, phosphatidylinositol glycan anchor biosynthesis, class X ( MGI:1919334)
Sequence:sense strand is shown

>T30183
CACTTGGAAGTAAGAGGCGGGAGAATTGCAGGTTAAAGGCCAACCTGAGCTGCAGAGTAAATTTTAATCC
AGCCTTAGCTAACCGGCAGTGATGCTATCAGAAAGTTTTAATATAGAAGCCCCCAACTACTTGTCCAATG
AATCTGCAGTCCTCATTTATGCCCGGCAGGATGCACAGTGCATCGACTGCTTCCAGGCCTTTTTACCTGT
GCACTATCGCTATCACCGGCCACATAAGAAAGATGGAGACACCCTCATTGTGGTCAACAACCCCGACTTA
CTGATGTACTGTGACCAAGAGTTTCCAATTTTGAAATGCTGGGCTCAGTCAGAAGTAGCAGCTCCTTGTG
CTTTGAAGAGTGAGGAGATCTGCCAGTGGAAAAGCATGCAGTACAAATCAATACTTAAGAATTTGACAGT
GCAGGTTCCAGTGGGACTGACTATACATACCTCTTTAGTGTGTTCTGTGACGCTGCTCATTACGATTCTG
TGTTCTACTTTGATCCTTTTAGCTGTTTTCAAATATGGCCACTTTTCCCTGT
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from the plasmid IMAGE:3489499), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 13809. Forward Primer - name:013809_F_IRAV04-07_I09_2010319C14Rik, sequence:CACTTGGAAGTAAGAGGCGG; Reverse Primer - name:013809_R_SP6_IRAV04-07_I09_2010319C14Rik, sequence:TACAGGGAAAAGTGGCCATA. The reverse primer contains a 5' extension containing an SP6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using SP6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:12663 same embryo
 EMAGE:12668 same embryo
 EMAGE:12666 same embryo
 EMAGE:12665 same embryo
 EMAGE:12664 same embryo
 EurExpress:euxassay_011460 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS