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EMAGE:14203

Cldn15 claudin 15 ( MGI:1913103)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203
"Pseudo-wholemount" of euxassay_003991. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003991_01 euxassay_003991_02 euxassay_003991_03 euxassay_003991_04
EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203
euxassay_003991_05 euxassay_003991_06 euxassay_003991_07 euxassay_003991_08 euxassay_003991_09
EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203
euxassay_003991_10 euxassay_003991_11 euxassay_003991_12 euxassay_003991_13 euxassay_003991_14
EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203 EMAGE:14203
euxassay_003991_15 euxassay_003991_16 euxassay_003991_17 euxassay_003991_18 euxassay_003991_19
EMAGE:14203 EMAGE:14203
euxassay_003991_20 euxassay_003991_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14203Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14203_wholemount_strong.wlz
14203_wholemount_moderate.wlz
14203_wholemount_weak.wlz
14203_wholemount_possible.wlz
14203_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14203_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5008
Entity Detected:Cldn15, claudin 15 ( MGI:1913103)
Sequence:sense strand is shown

>T5008
CTGCCAGGAAGCAGAGCCTCCCAGAGACCAGGCAGAGGCACTCAGACCTGACCTCCAGAAGACGGCAGAC
AAGAATCGCAGCTGGATGAGCGCTCCTTCAGCCTTCTCCCTCCTCAGTCTTCCGTGACATCCCTTTTGGG
CCAAAGCCCCCGGAATTCACCTGGAGGTGCCAACTCTCCCTCTCAATCCCTGGGGCTCAAGCCCCCTTGG
GGGACCTGCATCCCAGCATGTCGGTAGCTGTGGAGACCTTCGGCTTCTTCATGTCAGCCCTGGGACTGCT
GATGCTGGGGTTGACCCTTTCAAACAGCTACTGGAGAGTGTCTACGGTCCATGGCAACGTCATCACCACC
AACACCATCTTTGAGAACCTGTGGTACAGCTGTGCCACCGACTCCCTGGGAGTCTCCAACTGCTGGGACT
TTCCGTCCATGCTGGCCCTCTCTGGGTATGTCCAGGGCTGCCGGGCTCTCATGATCACCGCCATCCTCCT
GGGCTTCCTGGGCCTCTTTCTAGGCATGGTGGGACTCCGCTGCACCAACGTGGGCAACATGGATCTCTCC
AAGAAGGCCAAGCTGCTGGCCATTGCAGGGACCCTCCACATACTTGCTGGAGCCTGTGGGATGGTGGCTA
TCTCGTGGTACGCCGTCAACATCACTACTGACTTCTTCAACCCACTGTATGCTGGAACCAAGTATGAACT
GGGCCCCGCCCTCTACTTGGGCTGGAGTGCCTCCCTGCTCTCCATCCTGGGCGGCATCTGTGTCTTCTCC
ACCTGCTGCTGTTCCTCCAAGGAGGAACCAGCCACCAGGGCTGGGCTTCCCTACAAGCCTTCTACGGTTG
TGATACCCCGTGCCACCTCGGATGAGAGTGACATCAGCTTCGGTAAATATGGCAAAAACGCATACGTGTA
GGAAGCTCTGGCCTGCTGGACACCATTTCTTGTCCCACTGTCTCCAGGACCTGCAGGCAGACCAGTCTCC
AGTTAATAACCTCAGGACAGGCCAAATTTCCTGGCCTCACCCTGTGCCTGGAAGCCACTACCCACTCTAG
GCACACCTTATCTGGCACTCAGCCTCTCCCTGGAACAGAAGCTTCAGGGGCAACTTGCCTGCTTCTTACA
GCTGGACACAAGGGGACAGAGGTGTCTGCAGCATGTGACTCCATATAAATGTGTGCATGAATAAATGTAT
ATTGTGATTGTTCAGGGGGCACCAGGGGTCATGGAGTCACAGCCACATAAGGGAGTCCTTTTCAAACCAC
AGACTGTCAAGTCTGCCCAATTTGGGGGCTGTCTCATCTAGTGAGATAGTGTGTCAGGGAGCTGGGGAGA
TGGCTCAGTGAGTTGAGTGTTTGCTACCCAAGTATGAGGACCTGAGTTCAAATCCCCAGAACCTGTGTGA
ATGGCAGGCCATGGATACAATCCTGCAACCCAAGTATGCTAGGTTGAGGTATTCTTGAGGCTTCCTGGCT
TCCACCCTGGCTCCAGGCTCCATATGAGACGCAGTCTTAAGGGAATGAGGTGGAGCGCGATGGAGCAGGG
AGCTGGAAACCCTCTTCCCACCTTCTCAGGCACACAGACTTGTACATAGACTACACACATGCACACATTC
TCAACAAAAGGATTTGAAAGGGGGAGTCACTAACAACTGATCCAAGTCACCCACCTCAGGAGATTGCTAA
TAGCTGTGAAGCTCCTGGCCTGCTGAAAGTTCCTCTCTGTTGACTCTTGACCTATTTTCTCACAGCCTCA
CACAGGGGCAGTTGATCTAGAACAGGCATTGGTAGGTGCATGTGTGTTTGAAGGTTTGGGGTTTAAAATA
AAGATATTTTAAATGAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5250004 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5250004 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14202 same embryo
 EMAGE:14205 same embryo
 EMAGE:14204 same embryo
 EMAGE:14201 same embryo
 EurExpress:euxassay_003991 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS