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EMAGE:14428

Pgm1 phosphoglucomutase 1 ( MGI:97564)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428
"Pseudo-wholemount" of euxassay_004231. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004231_01 euxassay_004231_02 euxassay_004231_03 euxassay_004231_04
EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428
euxassay_004231_05 euxassay_004231_06 euxassay_004231_07 euxassay_004231_08 euxassay_004231_09
EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428
euxassay_004231_10 euxassay_004231_11 euxassay_004231_12 euxassay_004231_13 euxassay_004231_14
EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428
euxassay_004231_15 euxassay_004231_16 euxassay_004231_17 euxassay_004231_18 euxassay_004231_19
EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428 EMAGE:14428
euxassay_004231_20 euxassay_004231_21 euxassay_004231_22 euxassay_004231_23 euxassay_004231_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14428Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14428_wholemount_strong.wlz
14428_wholemount_moderate.wlz
14428_wholemount_weak.wlz
14428_wholemount_possible.wlz
14428_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14428_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7900
Entity Detected:Pgm1, phosphoglucomutase 1 ( MGI:97564)
Sequence:sense strand is shown

>T7900
CCGGCCTCCTCCGCCCGGTTGTGACTGCTGAGGGATGGCGGCGGCGACACCGACAGAGACACCGGCTCCG
GAAGGCAGTGGCTTGGGTATGGACGCGCGACTGGACCAGGAGACCGCGCAGTGGCTGCGTTGGGACCAGA
ACCCTTTAACCTCTGAGTCAGTGAAACAGCTCATTGCTGGAGGTAATAAAGAAGAGCTGCGGAAATGCTT
TGGGGCCCGGATGGAGTTTGGGACAGCTGGCCTTCGAGCGCCTATGGGAGCAGGGATTTCTCGAATGAAT
GACCTGACCATCATCCAGACCACACAGGGATTTTGCAGGTACCTGGAAAAGCAGTTCAGTGACCTGAAGC
AGAGGGGCGTGGTGATCAGCTTCGATGCGAGAGCTCACCCCGCCAGCGGGGGCAGCAGCCGGAGGTTTGC
CCGGCTGGCTGCGACTGCATTTATCACCCAGGGTGTTCCTGTATACCTCTTCTCTGATATAACCCCCACC
CCCTTTGTGCCGTACACCGTGTCGCACCTGAAACTCTGCGCAGGCATCATGATCACTGCCTCGCACAATC
CAAAGCAGGACAATGGCTATAAGGTCTACTGGGACAACGGAGCTCAGATCATCTCTCCCCACGATCGCGG
CATTTCTCAGGCCATTGAGGAAAATCTAGAGCCCTGGCCTCAGGCTTGGGAGGAGTCTTTGGTTGACAGT
AGTCCCCTTCTTCACAACCCCAGCGCGTCCATCGGTAATGACTACTTTGAAGACCTTAAAAAATACTGTT
TTCACAGGACAGTGAACAAGGAGAGCAAGGTGAAGTTCGTGCACACCTCTGTCCATGGTGTGGGCCATGA
GTTTGTGCAGTTGGCCTTCAAGGCTTTTGACCTTGCTCCTCCCGAAGCTGTTCCCCAACAGAAAGATCCG
GATCCCGAGTTTCCAACTGTCAAATACCCGAATCCTGAGGAGGGCAAAGGTGTCTTGACTTTATCTTTTG
CCTTGGCTGACAAAATCAAGGCCAAAATCGTCCTAGCCAATGACCCAGATGCTGACAGGCTCGCTGTGGC
TGAGAAGCAAGACAGTGGTGAGTGGAGAGTGTTCTCAGGCAATGAGCTGGGGGCCCTGCTGGGATGGTGG
CTCTTCACTTCCTGGAAAGAAAAGAACCAAGATCAAAGTAACCTCAAAGACACATACATGCTGTCCAGCA
CTGTTTCCTCCAAAATCTTGCGGGCCATAGCCCTGAAGGAAGGCTTTCATTTCGAGGAAACATTAACCGG
CTTCAAGTGGATGGGAAACAGAGCCCAACAGCTCGGAGACCAGGGGAAAACAGTCCTATTTGCATTTGAA
GAAGCTATCGGATACATGTGCTGTCCCTTTGTTCTGGACAAAGATGGCGTCAGTGCTGCTGTTATTTGTG
CAGAGCTGGCGAGCTTTCTAGCAACGAAGAATTTGTCTTTATCTCAGCAGCTAAATGCCATCTATGTGGA
GTACGGCTATCATATTACCACAGCTTCATATTTTATCTGCCATGATCAGGGCACAATTCAAAACTTATTT
GGAAACCTGAGAAACTATGACGGGAAGAATAATTATCCCAAAATGTGTGGCAAGTTTGAAATCTCTGCTA
TCAGGGACCTTACAACTGGCTATGATGATAGCCAGCCTGACAAGAAAGCTGTTCTTCCTACCAGTAAGAG
CAGCCAAATGATCACCTTCACCTTTGCTAATGGAGGTGTGGCCACCATGCGGACCAGTGGGACTGAGCCC
AAAATCAAGTACTACGCAGAGTTGTGTGCTCCCCCTGGCAACAGTGATCCGGAGCATCTGAAAAAGGAAC
TGGATGAGTTAGTCGGTGCCATTGAAGAACATTTTTTCCAGCCACAAAAATATAACCTACAGCCAAAAGC
AGAATAAAACATTCCAGTACTGGATAGGATTAAATTTACCTCCAATAAACTGAACTTGATTGTTAAAGCA
ATAATATTTTAGGGCCAAGTGATTCAGATAATCACCACAAGTATTTACATATTTTCAACAGCTCTATCTT
CCTTGTGATTTTTTTTTTAATTATTATTATTTTTAGCCTGAAAAGTGAATAAAAAAGCTTGGCCAAACCC
AACAAACTAACATCTCTATGAAAATGTTAAATCTGGGCATTATCTGAATTTTTTAAATAAAGATTTAATT
TTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6510389 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6510389 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14426 same embryo
 EMAGE:14429 same embryo
 EMAGE:14427 same embryo
 EMAGE:14425 same embryo
 EMAGE:14424 same embryo
 EurExpress:euxassay_004231 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS