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EMAGE:14429

D2Ertd750e DNA segment, Chr 2, ERATO Doi 750, expressed ( MGI:1289298)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429
"Pseudo-wholemount" of euxassay_004225. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004225_01 euxassay_004225_02 euxassay_004225_03 euxassay_004225_04
EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429
euxassay_004225_05 euxassay_004225_06 euxassay_004225_07 euxassay_004225_08 euxassay_004225_09
EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429
euxassay_004225_10 euxassay_004225_11 euxassay_004225_12 euxassay_004225_13 euxassay_004225_14
EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429
euxassay_004225_15 euxassay_004225_16 euxassay_004225_17 euxassay_004225_18 euxassay_004225_19
EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429 EMAGE:14429
euxassay_004225_20 euxassay_004225_21 euxassay_004225_22 euxassay_004225_23 euxassay_004225_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14429Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14429_wholemount_strong.wlz
14429_wholemount_moderate.wlz
14429_wholemount_weak.wlz
14429_wholemount_possible.wlz
14429_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14429_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7154
Entity Detected:D2Ertd750e, DNA segment, Chr 2, ERATO Doi 750, expressed ( MGI:1289298)
Sequence:sense strand is shown

>T7154
GCAGCCGGCACCGGGGGTCCAGCCAAGCCACCCGGCTACGATGGCCAGTGCTAAGACGGTGTGCGATGCG
CAGCCTCACTCGATGCCGAGCTGCGGCTTGCCCGCAGATACACAAACTCGAGCTACTTCTAAACTACCTG
TTAAATCCAAAGAAGCGGATTTGCTTAGACATCTTCATCCAGGAGGGCCAGAGCCTGATGTTACAAAAGT
CACCAAATCGAGACGAGAGAATGGGCAGGTGAAAGCGGCAGAGACTGCCAGCAGGAGGAACCTCAGAAAC
AGCTACAAACCGTTTAATAAGCAAAAACCGGAGGAGGAACTAAAGGATAAAAATGAGCTGCTGGAGGCTG
TCAACAAGCAGTTACACCAGAAGCTGACAGAGACTCAGGGAGAGCTGAAGGACCTGACACAGAAAGTGGA
GCTACTGGAGAAGTTTCAGGATAACTGCTTAGCACTTTTGGAGAGCAAAGGTCTCAACCCAGGCCAAGAG
ACCCTGGCATCAAAGCAGGAACCCACCACAGATCACACGGACTCCATGCTGCTGCTCGAAACTTTGAAAG
ACGAACTGAAGGTTTTCAATGAAACCGCCAAGAAGCAGATGGAGGAGCTACAGGCCTTGAAGGTGAAGTT
GAAGCTGAAAGAAGAGGAGAGTGTCCAGTTCCTGGAACAGCAGACCTTATGTAAGGACGAAGCCAGTGAC
TTCACAATAATCCTAGAGGAAATGGAGCAGCTCTTAGAAATGTAGCTCAAGGCAGGTGGCCGGACGGCTT
CTTCCTGGATAAACCCTCGGCAGAGGCTACTTAGGATATCTTCAAGGACTCACCATCCCTTAGGTAAAGA
CCTTCTGCAGCAGTTGATCCGATAAGGCCAGTTGATGCTGGGGTTCCTCCTTTAAGCAGATTGCCCCACC
TTCAGATGGCTCAGCTCTCCTGCAAGAGAGGAACCTGGGAGTTTGACTCCATTTCCTGTGCAGCAGAGAG
AGCAGCAGCCCTTAGAACTAGGATACTAAACCAGCTGCCTTGGAGACTCTAGAGACTCGGAAACATGGGA
AGAAGGCCCACACCACAACAGCACGAGTGCTGTGCGAGAGATGTGACTGTGAGCCATGCTGTCCCCTTGT
CTCTCTGGTTGAGTTAAGTTTTATGAACTTGAAATTCTTGAAGTTTTTTTGGCTTAATAAATGGGGGTGG
AGGTATAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4021550 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4021550 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14426 same embryo
 EMAGE:14427 same embryo
 EMAGE:14425 same embryo
 EMAGE:14428 same embryo
 EMAGE:14424 same embryo
 EurExpress:euxassay_004225 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS