EMAGE mouse gene expression spatial database

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EMAGE:14440

Mea1 male enhanced antigen 1 ( MGI:96957)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_004254. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_004254_01	euxassay_004254_02	euxassay_004254_03	euxassay_004254_04

euxassay_004254_05	euxassay_004254_06	euxassay_004254_07	euxassay_004254_08	euxassay_004254_09

euxassay_004254_10	euxassay_004254_11	euxassay_004254_12	euxassay_004254_13	euxassay_004254_14

euxassay_004254_15	euxassay_004254_16	euxassay_004254_17	euxassay_004254_18	euxassay_004254_19

euxassay_004254_20	euxassay_004254_21	euxassay_004254_22	euxassay_004254_23	euxassay_004254_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

14440_wholemount_strong.wlz

14440_wholemount_moderate.wlz

14440_wholemount_weak.wlz

14440_wholemount_possible.wlz

14440_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:14440_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T7175
Entity Detected:	Mea1, male enhanced antigen 1 ( MGI:96957)
Sequence:	sense strand is shown >T7175 CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGGGCTCTGAGAGGCCCCTGCCCGGATGGCAGCAGT AGTTCTAGGGGGAGACACCATGGGCCCTGAGCGTATCTTCCCTAATCAGACTGAGGACTTAGGGCCACAT CAGGGTCCTACAGAAGGAACTGGGGATTGGAGCAGTGAAGAACCCGAGGAAGAGCAGGAGGAAACAGGAG CAGGCCCAGCAGGCTACTCGTACCAGCCCCTCAATCAAGACCCTGAACAAGAAGAGGTGGAATTGGCACC AGTGGGTGAAGGAGAAGATGGAGCTGCTGACATCCAAGATCGGATCCAGGCCCTGGGGCTTCATCTGCCA GACCCTCCATTGGAGAGTGAGGATGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCACAGCTCTATCC CCATGGACCCAGAACATGTAGAGCTGGTGAAAAGGACGATGGCTGGAGTAAGCCTGCCTGCACCAGGGGT TCCTGCCTGGGCTCGGGAGATCTCGGACGCTCAGTGGGAAGATGTGGTACAGAAAGCCCTCCAAGCCCGG CAGGCATCCCCTGCCTGGAAGTGACCAGAGAGCGAGCCGCCTTACCTCCTTACATTCCAAGTCAGGACCA GCACAGGACTAACAACTCTGGTCTTAACAGCCTCCTCCTTCCCATGTCCCTTTCACACCAAGGCGACTCA GACCTCTCAGAGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGCCCAAGCCCAGCCCACCTTA GCATGTATCACTCTGTGGAGAATAAAGCACCCTGTGTACACAGCCAGAAGCCACAAAAAAAAAAAAAAAA AA
Notes:	The probe template was PCR amplified from IMAGE:4035701 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4035701 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:14442 same embryo
	EMAGE:14441 same embryo
	EMAGE:14439 same embryo
	EMAGE:14437 same embryo
	EMAGE:14438 same embryo
	EurExpress:euxassay_004254 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source