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EMAGE:17286

Sra1 steroid receptor RNA activator 1 ( MGI:1344414)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17286
euxassay_003676_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5702
Entity Detected:Sra1, steroid receptor RNA activator 1 ( MGI:1344414)
Sequence:sense strand is shown

>T5702
CGGAAGTGGAGATGGCGGAGCTGTACGTGAAGCCCGGCAACAAGGAACGCGGCTGGAACGACCCGCCACA
ATTCTCCTACGGGCTCCAGACTCAGACTGGTGGACCCAAACGCACTCCCCTTACTAAGAGGGTCGCGGCC
CCACAGGATGGATCCCCTAGAGCCCCAGAAACTTCTGGACCACCTCCAGTGGATCATCCACCTCCTTCAA
GTAAGGCTTCCAGGCCTCCGCCCATGGGGAGCTGTCCTGCTACTGGTGTGGAGCCCCCAAGTTCCCCAGT
CATTGAGTCTGAAACTCTGATAGAAGACGTGCTGAGACCTCTGGAACAGGCATTGGAGGACTGCCATGGT
CACACAAAGAAACAGGTATGTGATGATATCAGCCGACGCTTGGTGCTGCTTCGAGAACAGTGGGCTGGAG
GGAAGTTGTCAATACCTGTAAAGAAGAGGATGGCACTGCTAGTGCAAGAACTTTTACATCACCAGTGGGA
TGCAGCAGATGACATTCACCGATCACTCATGGTTGACTATGTGACTGAGGTCAGTCAGTGGATGGTGGGA
GTAAAAAGATTAATTGCAGAAAAGAGGAGTCTATCTTCAGAGGAGACCAAAGAAGAGAAATTTACAGTGG
AACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATCATAATGCCTGTGGCTCCCCAGACTCACTTC
ACCTGACTTCCTATGCCTTAGTGTGGAAGGCTTCTTCTTCCTTTTTACCACCAGGGAGACTATTGGTCTT
GTGGGTCTTGACCAAAGATCCTATCTAGACCACTGCAAGATCACTTGTTATGTACATTTCAATAAACATC
TCAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2646489 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2646489 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17288 same embryo
 EMAGE:17283 same embryo
 EMAGE:17285 same embryo
 EMAGE:17284 same embryo
 EMAGE:17287 same embryo
 EurExpress:euxassay_003676 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS