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EMAGE:29867

Kcnj8 ( MGI:1100508)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6049
Entity Detected:Kcnj8, ( MGI:1100508)
Sequence:sense strand is shown

>T6049
CCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTCCTCCCCGCGTGCACCATGGATCGCACCTTCT
AGAGTCTTAACTCAGTTCTGGAGGACCAACATCCCCCGGATCTGCACTTCAGGAGGTCTCTGCTCCCGGG
ATGCGAGAGCCTGGGACCAGCCCGCCCTGTGCGGAGTTCCAGCCGCAGCCGGGAGCGCAAACCCGAGTCT
TCTAGGAGGACGCGTGTGGAGGAAAGGAGCCACAGGTTCAGGCAGGTGCATAGGCGGGCTATGGTGAAAG
GAAGATGTTGGCCAGGAAGAGCATCATCCCGGAGGAGTATGTGCTGGCGCGCATCGCAGCGGAGAACCTG
CGCAAACCGCGCATCCGCGACCGTCTCCCCAAAGCCCGCTTCATCGCCAAGAGCGGAGCCTGCAACCTGG
CACACAAGAACATCCGAGAGCAAGGTCGCTTCCTGCAGGACATCTTCACCACCTTGGTAGACCTGAAGTG
GCGTCACACGCTGGTCATCTTCACCATGTCCTTCCTCTGCAGCTGGCTGCTCTTTGCTATCATGTGGTGG
CTGGTGGCCTTCGCCCACGGGGACATCTATGCTTACATGGAGAAAGGCACCATGGAGAAGAGTGGCCTGG
AGTCCGCTGTCTGTGTGACCAATGTCAGGTCATTCACGTCTGCGTTTCTCTTCTCCATTGAGGTTCAAGT
GACCATTGGGTTCGGAGGGAGAATGATGACTGAGGAATGCCCTCTGGCCATCACGGTTTTGATTCTGCAG
AACATCGTGGGTCTGATCATCAACGCGGTCATGTTGGGTTGCATCTTCATGAAGACGGCGCAGGCCCACA
GAAGGGCAGAGACGCTGATTTTCAGCCGCCATGCTGTGATTGCCGTCCGCAATGGCAAGCTGTGCTTCAT
GTTCCGGGTGGGTGACCTGAGGAAGAGCATGATCATTAGCGCCTCGGTGCGCATCCAGGTGGTCAAGAAA
ACCACGACGCCAGAAGGGGAGGTGGTGCCTATTCATCAGCAGGACATTCCTGTTGATAATCCCATCGAGA
GCAATAATATCTTCCTAGTGGCCCCATTGATCATCTGCCACGTGATTGACAAGCGTAGCCCCCTGTATGA
TATCTCAGCAACTGACCTTGCCAATCAAGACCTGGAGGTCATAGTGATTCTCGAGGGCGTGGTAGAAACC
ACAGGCATCACCACACAAGCGCGGACCTCCTACATTGCGGAGGAGATCCAGTGGGGACACCGCTTCGTGT
CAATTGTGACTGAGGAGGAGGGCGTGTACTCTGTGGACTATTCCAAATTTGGTAACACGGTGAGAGTGGC
TGCGCCAAGATGCAGTGCCCGGGAGCTGGATGAGAAGCCTTCCATCCTGATTCAGACCCTCCAAAAGAGT
GAACTGTCGCACCAGAATTCTCTGCGGAAGCGCAACTCCATGAGGAGAAACAACTCCATGAGGAGAAACA
ACTCCATCAGGAGGAATAACTCTTCCCTCATGGTGCCCAAGGTGCAGTTCATGACTCCAGAAGGAAACCA
GTGTCCATCCGAATCATGAGGGCAGGATGACCGGAGACAGTTACTTGTTGAGTCCTGATGACTGATAGCC
CTGAACAGTCAGTCACTCACTGTGTCCTGATGACTGAGAGACAATCCGGAGACAGTTCATTGAGTTCCGA
TGATCAAAATATTGCACTCATCACCAGTTCAGGGCTGGAGCACAGTATTCCTATCCTAATGCACTGAGAA
ATATTCATATTTGAGACATTAAACTTCCTGTACTAATAAACAATAACACACAAACCCGAGCTCTTTATTC
TCCTCTCATCTTAAAATTCTGTTTTCTTCCCAGCAGTCTCTGTAGTCAGGTCAGTTGGCCTGTGTTTTTG
AGCTTCTGTCATTTAGCAGAGATGAGATCTTCTACCCAAGCCCAGTTTCGTCATTCTTAGGTCCTGCACC
CTAAAGTAAGGGCAGAGTAGAGAGACGTCCTGGGTTAACACGGTGTGTGATGTGGGGTTAACCCAGTGTG
TGATATGGGGGTAACACGTTGTGTGATGCGGTAAAACATGGAAGCTGGGCAGCTGGGTAGCCTTTTATTC
AGAGTCTGGGGCTTGAATTCATTTTTTTACATGAGCCATTGAACCACACGGGTCATCATGAATATGTTCA
AATCTAACCTTCAAAGACTCAGGTTGCTAACCAAGCAAATAGCACCTGCTGGGTTAATTATTCCAAAAAA
AAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3490123 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3490123 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002197 same experiment
 EMAGE:29869 same embryo
 EMAGE:29861 same embryo
 EMAGE:32112 same embryo
 EMAGE:32104 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS