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EMAGE:29947

H2afy3 H2A histone family, member Y3 ( MGI:1914802)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947
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EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947
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EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947
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EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947 EMAGE:29947
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7700
Entity Detected:H2afy3, H2A histone family, member Y3 ( MGI:1914802)
Sequence:sense strand is shown

>T7700
CACAGATACAACCCCAAGAAAGGCAGGGTCCTGCCCAGCACCGGCGGCACGCGGGCCGAACCTGCGGCCG
GGATTGGCGCGCACTAGGCCACCGGGCGCCCGGAGCCCGCGGTGCAGCACCAGTATTGTGTAGGTGCCAA
GAGACCACTCTGTCAGCAAGCTGAGAGGAAAATCGAGGCAAGATGTCAGGCCGGAGCGGGAAGAAGAAAA
TGTCCAAGCTGTCCCGGTCAGCCAGGGCCGGCGTCATCTTTCCAGTAGGCCGGTTGATGCGCTACTTGAA
AAAGGGAACCTTCAAGTACAGGATCAGCGTAGGTGCTCCCGTCTACATGGCTGCGGTCATTGAGTACCTA
GCAGCGGAAATCCTGGAGTTGGCTGGGAACGCTGCGAGGGACAACAAGAAGGCACGGATAGCCCCCAGAC
ACATCCTGCTGGCCGTTGCCAACGACGAGGAACTCAACCAGCTACTGAAAGGAGTGACTATCGCCAGTGG
GGGTGTCCTGCCGAGAATCCACCCCGAACTGCTGGCCAAGAAGCGAGGGACCAAAGGCAAGTCAGAGACG
ATCCTCTCCCCACCCCCAGAGAAAAGAGGAAGGAAGGCCGCATCAGGCAAGAAGGGGGGTAAGAAATCCA
AGGCCACCAAGCCACGGACGTCCAAGAAGTCTAAAGCAAAGGACAGCGATAAAGAAGGAACATCAAATTC
CACCTCGGAGGATGGGCCGGGAGATGGCTTCACCATCTTGTCTTCGAAGAGCCTCGTTCTGGGGCAGAAG
CTATCCCTGACCCAGAGTGACATCAGCCATATTGGCTCCATGAGGGTGGAGGGCATCGTCCACCCAACCA
CAGCCGAGATCGACCTCAAGGAAGAGATAGGGAAAGCCTTGGAAAAGGCTGGGGGTAAAGAGTTCTTGGA
AACAGTGAAGGAGCTTCGCAAGTCCCAAGGCCCTTTGGAAGTCGCTGAAGCTGCCGTCAGCCAATCCAGT
GGACTCGCAGCCAAATTTGTCATCCACTGTCACATCCCCCAGTGGGGCTCCGACAAATGTGAAGAACAGC
TGGAAGAGACCATCAAAAACTGCCTGTCTGCAGCAGAGGACAAGAAGCTTAAATCCGTCGCCTTCCCACC
GTTCCCCAGTGGCAGAAACTGCTTCCCCAAACAGACGGCCGCCCAGGTGACCCTCAAGGCCATCTCGGCT
CACTTCGACGACTCGAGCTCGTCCTCGCTGAAGAATGTGTACTTCCTGCTCTTCGACAGCGAGAGCATCG
GCATCTACGTGCAGGAGATGGCCAAACTGGACACCAAGTAGCTCTCTCCAGTGGCGGCGAAGGAGGAGGA
TCGGCGTGACGTCACAAGAGCGGGGGTTTTATTTTTTACAAGGATTGCAGAAGGGTGACGGGGCATGGGA
GCGGAGGGTGGCTGAGAGGGTGAACGGAGGCAGCGGGAACAGGTCCTGCCTGCCTGGTGAAGGGGTCCGG
TGCATTTTATATTCTCTTTACAAAGGGCCTCTCTTCCACAGTTAACCAGGTCTCCACCAGGGCTTTCTTT
CCATGTGTTTTTCTTCTTGTTGTTTTAGAACTTTTTCAAAAACAAACAAGACAAACAAACATAAAAATAG
GCCTTCTTTAGATTTATAGCAGTGACTTTTACACACTCTCACACACACACACACACACAAAATCTGTTCA
CAGTTTCTGTGTCTTTGGGTTCCTCCTTTTTCCAAGAGAAAAGGATGTGACTGCCCATCCTAGGTATACT
GGCTGTCTCCCTCAGTGGAGAAGATGAGAAGAACATCTTGGGGTGCTTTTCTGTTATAGGGTCCCCTCCC
TGACGCCTAAAATATTTGTAACTACACCTAAAAGGGTTTTGCTTCGGGATTTTTGTTTGTTCGGTTTTTT
TGTTTTTTTAAAGAAAAAGAAAAATGAGAAGAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6307273 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6307273 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_007116 same experiment
 EMAGE:31758 same embryo
 EMAGE:31671 same embryo
 EMAGE:31285 same embryo
 EMAGE:31707 same embryo
 EMAGE:31678 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS