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EMAGE:30378

Fars2 ( MGI:1917205)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5969
Entity Detected:Fars2, ( MGI:1917205)
Sequence:sense strand is shown

>T5969
CCCACGCGTCCGCGGCGCCCAGCGCGCCCAGCGTCTCGGTAGCCAGAGGTTAAGCTCAGTGACGGCGGAG
TGAGTGTGTGGCCGCTTTGCGGACTTCGAAACGCCCGCGTTTGGTTTCCCCGGCGTACGCTGGAGTTTGT
GAGAAGCTTCTATAATGGTCTGCTTGGCTCTCGTCAGAGCTGCCTATGAGCACATCTACCTGGTGAGGAA
GGTCAGTCATGCCTGCAGATGCCATCAACATCGGGCTTGGAGCTCAAAGCCAGCTGCATCACAGTCTGCT
GTCCAGGGTGCTCCAGGCAGTGTGCTGGAGATACTTGGTAAATCCTACCCTCAGGATGACCACACTAACC
TCACCCAGAAGGTCCTTTCCAAGGTGGGCAGGAACCTGCACAACCAGAAGTTCCACCCTCTGTGGCTGAT
TAAGGAGCGGGTGAAGGAGCACTTCTACCAGCAGTATATGGTGCGATCCAGGACACCTCTATTCTCCGTC
TATGACCAGCTTCCTCCAGTGGTCACCACCTGGCAGAACTTTGATAGCCTGCTAATCCCAGCTGACCACC
CCAGCAGGAAAAAGGGGGACAACTATTACTTGAATCGGGCACACATGCTGAGAGCACACACATCAGCGCA
TCAGTGGGACTTGCTGCATGCGGGACTTAATGCCTTCCTTGTGGTAGGTGACGTGTATCGTCGTGACCAG
ATTGATTGCCAGCACTACCCAGTTTTCCACCAGCTGGAGGGTGTCCGGCTCTTCTCCAAGCATGAGTTAT
TTGCTGGCGTAAAGGATGGAGAAAGCTTGCAGCTCTTTGAAGAAGGTTCTCGCTCTGCTCATAAGCAGGA
GACACACACCATGGAGGCTGTGAAGCTTGTGGAGTTCGACCTTAAACAAGTACTGACTAGGCTTGTGACA
CATCTTTTTGGAGATGGGCTGGAGGTTCGGTGGGTGGATTGCTACTTCCCCTTCACCCACCCTTCCTTCG
AGATGGAGATCAACTTCCGTGGAGAATGGCTTGAAGTCCTTGGCTGCGGTGTGATGGAGCAGCAGCTTGT
CAATTCAGCTGGTGCTCAGGATCGAATCGGCTGGGCGTTTGGCCTGGGATTAGAAAGATTGGCGATGGTC
CTCTACGACATTCCTGACATCCGCCTTTTCTGGAGTGAGGATGAGCGCTTCCTGAAGCAGTTCCTCCTGT
CGGACATCAACCAGAGTGTCAAGTTTCAGCCTCTTAGCAAGTACCCCGCCGTGTTCAATGACATTTCATT
CTGGCTGCCCTCTGAGAACTACACGGAGAATGATTTCTATGACATCGTCCGAACAGTCGGAGGAGACCTG
GTAGAAAAGGTTGATCTTATAGACAAGTTTGAACATCCAAAGACACACAGGACCAGCCACTGCTACCGCA
TTACCTACCGCCACATGGAACGGACACTGTCCCAGAGAGAAGTCGGCAATGTCCACCAGGCTGTGCAGGA
GGCCGCCGTGCAGCTGCTGGGTGTGGAGGGCCGTTTCTGATGCAGTGGCAGTCCACAGGCCACAGCCCTC
ATAGAGCTCCAGGGAGCACCAGGAAGGGGGAAACACATTGTTTGTGAACTGGAGTGTCTGCCCTCACTTG
ACAGATGGGTCTACTTTAGGACGTCACGAAATAAAGGATCACTTTTCAGAAGCAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3484842 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3484842 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003571 same experiment
 EMAGE:31182 same embryo
 EMAGE:30377 same embryo
 EMAGE:30189 same embryo
 EMAGE:30376 same embryo
 EMAGE:30203 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS