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EMAGE:31080

Cd200r1 ( MGI:1889024)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080
euxassay_007151_01 euxassay_007151_02 euxassay_007151_03 euxassay_007151_04 euxassay_007151_05
EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080
euxassay_007151_06 euxassay_007151_07 euxassay_007151_08 euxassay_007151_09 euxassay_007151_10
EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080
euxassay_007151_11 euxassay_007151_12 euxassay_007151_13 euxassay_007151_14 euxassay_007151_15
EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080 EMAGE:31080
euxassay_007151_16 euxassay_007151_17 euxassay_007151_18 euxassay_007151_19 euxassay_007151_20
EMAGE:31080 EMAGE:31080 EMAGE:31080
euxassay_007151_21 euxassay_007151_22 euxassay_007151_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
thymus primordium
strong strong
single cellstrong expression: see section 11 12 13 14 15
liver left lobe
strong strong
single cellstrong expression: see section 01 02 03 04 05 06 07 08 09 10 11
liver right lobe
strong strong
single cellstrong expression: see section 12 13 14 15 16 17 18 19
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8074
Entity Detected:Cd200r1, ( MGI:1889024)
Sequence:sense strand is shown

>T8074
AAGAGGTAATCCAGTCCCAGAGAAGTTTCTTCTCTTCCAAGCCAGGCTAAAGCACGCGAGTGGAAGGAGT
TGGCAGGCAGGACGGGGCTGCTCCCTGCGGATGGGTTAAGAGGTGCGCTACCACGCAGAAGCCAACCCGA
GAGAAGAGGGATCCGGGTTATGGTCACTGCTGCTCCCTTACCTCTGAGGAGAAAAGGTACCGAGTGAGCG
GCGGAAAACCAGAAAACCGAAATGTTTTGCTTTTGGAGAACTTCTGCCCTAGCAGTGCTCTTAATATGGG
GGGTCTTTGTGGCTGGGTCAAGTTGTACTGATAAGAATCAAACAACACAGAACAACAGTTCATCTCCTCT
GACACAAGTGAACACTACAGTGTCTGTACAGATAGGTACAAAGGCTCTGCTCTGCTGCTTTTCTATTCCA
CTGACAAAAGCAGTATTAATCACATGGATAATAAAGCTCAGAGGCCTGCCATCCTGCACAATAGCATACA
AAGTAGATACAAAGACCAATGAAACCAGCTGCTTGGGCAGGAACATCACCTGGGCCTCCACACCTGACCA
CAGTCCTGAACTTCAGATCAGTGCAGTGACCCTCCAGCATGAGGGGACTTACACATGTGAGACAGTAACA
CCTGAAGGGAATTTTGAAAAAAACTATGACCTCCAAGTGCTGGTGCCCCCTGAAGTAACCTACTTTCCAG
AGAAAAACAGATCTGCAGTCTGTGAGGCAATGGCAGGCAAGCCTGCTGCACAGATCTCTTGGTCTCCAGA
TGGGGACTGTGTCACTACGAGTGAATCACACAGCAATGGCACTGTGACTGTCAGGAGCACATGCCACTGG
GAGCAGAACAATGTGTCTGATGTGTCCTGCATTGTCTCTCATTTGACTGGTAACCAATCTCTGTCCATAG
AACTGAGTAGAGGTGGTAACCAATCATTACGACCATATATTCCATACATCATACCATCAATTATCATTTT
GATCATCATAGGATGCATTTGTCTTTTGAAAATCAGTGGCTTCAGAAAATGCAAATTGCCAAAATTAGAA
GCTACTTCAGCTATTGAGGAGGATGAAATGCAGCCTTATGCTAGCTATACAGAGAAGAGCAATCCACTCT
ATGATACTGTGACTAAGGTGGAGGCATTTCCAGTATCACAAGGCGAAGTCAATGGCACAGACTGCCTTAC
TTTGTCGGCCATTGGAATCTAGAACCAAGAAAAAAGAAGTCAAGAGACATCATAATTACTGCTTTGCTTT
CTTTAAAATTCGACAATGGAAGGACTACTTGGAAATTAGCTCTTCCAAGGCTATTAAAAAGCACAAATGT
TCTAATGAAATTGCATTTAAATTCTATCATTGGAAGTTTGGAATCTCTGCTGCTACCTGTTAATTTTAGG
AAGAACTGATTTAATTATTACAAAGAAAGCACATGGTTATGGTGAAATATCAAGTTGTGCAATAAAGTAT
GATGAAAACTGAGTTTCCTCAAGAAATAACTGCAGGAGGAACAATCATCACTAAAGAATTTCATGTGAGT
TCTTACAAAAAAATTCCTATGTATACATGACTATGGTATGTGTGTCCAATTACATGTTTATTTACAAATG
TGTATATATGCACACATTTGCTTTTCAGGACATCTCCTTGTAAAAAACACACTGGAGTTTTGGATTTATA
AAAGCTTATAAAGTGAGCATTGGAGATATTTTTATATCAGCATAAGTAAATCTACCTCATTCTTTTTAAT
GGCTACATAGAATTCTCCTGTATGATTACATTGTAATTTAATTAATCATGGCCCTTGGATTTTGTGTTGT
GTGTGGTATTAAACAAAACCATGTAGAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAGGGGGGGC
Notes:The probe template was PCR amplified from IMAGE:30072503 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30072503 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_007151 same experiment
 EMAGE:30833 same embryo
 EMAGE:30164 same embryo
 EMAGE:30001 same embryo
 EMAGE:29951 same embryo
 EMAGE:31149 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS