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EMAGE:32093

1810047C23Rik ( MGI:1913679)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093
euxassay_002185_01 euxassay_002185_02 euxassay_002185_03 euxassay_002185_04 euxassay_002185_05
EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093
euxassay_002185_06 euxassay_002185_07 euxassay_002185_08 euxassay_002185_09 euxassay_002185_10
EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093
euxassay_002185_11 euxassay_002185_12 euxassay_002185_13 euxassay_002185_14 euxassay_002185_15
EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093 EMAGE:32093
euxassay_002185_16 euxassay_002185_17 euxassay_002185_18 euxassay_002185_19 euxassay_002185_20
EMAGE:32093 EMAGE:32093
euxassay_002185_21 euxassay_002185_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
orbito-sphenoid
strong strong
regionalstrong expression: see section 02 03 04 05 moderate expression: see section 01 06 07 18 19 20 21 22
viscerocranium
moderate moderate
regionalmoderate expression: see section 07 08 09 16 18
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6062
Entity Detected:1810047C23Rik, ( MGI:1913679)
Sequence:sense strand is shown

>T6062
CGGACGCGTGGGGACCCTTGCTTGCACGAAGTAGGTGTTCTTGCCATCGCCAGTGGTGCTTGGTGGTTTC
CCAAAACTATGCTCTATGGATATACTCTTCAGAATAAGAGGCGGCTTCGATCTGGCTTTTCAGCTAGCAC
CACCTAAAGAAATGTTTATCAAGAACGCACTGCGACAGGTGTTGAGCGACCTGACTACCAAGCTCTCCTC
AGATGCTCTTGTGCTCAGAGTTTGCAACAGTTCCGTGTACCTGTGGCCGAACAGCGACGCAAACACGGGG
GAGCTGACTGACAGCTCTGCCTGTAAGAACGTAGTGCGCTTCATTCAATTTGATCAAGAGGAGGATACAA
AGCGAAAATTCATTAAAAAGAAAGACAAAAAGTTAACTGACACGCAACAGATAGTAAATATAGACCTCAT
GCTGGAGATATCGACCCCTCTGGGAGCCGTAACCCCCATCCTGGAGAGGGAAAATGAAGAGCACCACTAC
ATTAACATGAGCTTGCCAATTGACGCCGTTGTGTCTGTTGCTCCAGAGGAATCATGGGGAAAAGTGCGCA
AACTTCTAGTGGATGCAATTCTCAGGCAGCTAGTTGATGTGGAAAAATGCATCCTGAGATATATGAAAGG
AACGTCTATTGTGGTCCCCGAGCCACTGCACTTTCAATTGCCAGGGAAAAAGAATCTTGTAACGGTTTTA
TATCCATCAGGAATCCCAGATGATCAGCTCCAAGCCTATCGAAAGGAGTTACATGATCTCTTCAATCTGC
CTCATGACAGACCTTATTTCAAAAGGATCAATGCTTATCACTTTCCAGATGAACTATATAAAGATGGCTA
TATCAGAAACCCACATACTTATCTGAGTCCACCTAACATAGAGGGTAGTATGATTTGTGTGGTCCAGGGC
ACCTATGCTTATCATCATTATATGCAAGATCGGATTGATGACAATGGTTGGGGCTGTGCTTATAGGTCCC
TACAGACTATCTGCTCATGGTTCAGACATCAGGGTTACACAGAGAGGTCCATTCCCACACACAGGGAAAT
TCAGCAGGCTCTAGTTGATGCCGGCGACAAGCCAGCAACATTTGTTGGATCACGGCAGTGGATTGGGTCT
ATTGAAGTACAGATGGTACTAAACCAACTGATTGGTGTGACTTCGAAAATACTGTTTGTCAACCAAGGTT
CAGAAATGGCTTCTCAAGGACGGGAACTAGCCAACCATTTCCAGAATGTGGGCACCCCAGTGATGGTCGG
GGGAGGGGTATTGGCTCACACAATACTAGGAGTCGCATGGAATGAAACCACGGGGCAGATAAAATTCCTG
ATTCTAGACCCACACTATACAGGTGCTGAAGACCTGCAGGTTATGTTGGAAAAGGGCTGGTGTGGATGGA
AGAGTCCAGACTTTTGGAACAAGGATGCATACTATAACTTATGCCTTCCTCAACGACCTAATGCTCTTTA
AATTATCTTGGAGGCAAGACTATGAATATAAAAGAGCTGTTCTAATGTTAATAAAAGCATACATAATTTT
AAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3490744 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3490744 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002185 same experiment
 EMAGE:31196 same embryo
 EMAGE:30212 same embryo
 EMAGE:29862 same embryo
 EMAGE:32114 same embryo
 EMAGE:31666 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS