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EMAGE:7010

Tmed10 transmembrane emp24-like trafficking protein 10 (yeast) ( MGI:1915831)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010
"Pseudo-wholemount" of euxassay_002551. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002551_01 euxassay_002551_02 euxassay_002551_03 euxassay_002551_04
EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010
euxassay_002551_05 euxassay_002551_06 euxassay_002551_07 euxassay_002551_08 euxassay_002551_09
EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010
euxassay_002551_10 euxassay_002551_11 euxassay_002551_12 euxassay_002551_13 euxassay_002551_14
EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010
euxassay_002551_15 euxassay_002551_16 euxassay_002551_17 euxassay_002551_18 euxassay_002551_19
EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010 EMAGE:7010
euxassay_002551_20 euxassay_002551_21 euxassay_002551_22 euxassay_002551_23 euxassay_002551_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7010Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7010_wholemount_strong.wlz
7010_wholemount_moderate.wlz
7010_wholemount_weak.wlz
7010_wholemount_possible.wlz
7010_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7010_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5183
Entity Detected:Tmed10, transmembrane emp24-like trafficking protein 10 (yeast) ( MGI:1915831)
Sequence:sense strand is shown

>T5183
GGCCCCGGGTGGTGAACGAGGCTCCGGCACCATGTCTGGTTTGTTTGGCCCACTCTCCCGGCCTGGCCCT
CTCCCGTCCGCCTGGCTCTTTCTGTTGCTGCTCGGCCCCAGCTCGGTCCTCGGCATCTCCTTCCATCTGC
CCGTGAACTCTCGCAAGTGTCTCCGAGAGGAGATCCACAAGGACCTGCTGGTGACGGGCGCCTACGAGAT
CACCGACCAGTCTGGGGGCGCTGGCGGCCTGCGCACCCACCTCAAGATCACAGATTCTGCTGGCCATATT
CTGTATGCCAAAGAGGATGCAACCAAGGGGAAGTTTGCCTTTACCACGGAAGACTATGACATGTTTGAAG
TGTGTTTTGAGAGCAAGGGAACAGGGCGGATACCTGACCAACTCGTGATTCTAGACATGAAGCATGGAGT
AGAGGCGAAAAATTATGAAGAGATTGCAAAAGTCGAGAAACTCAAACCACTGGAGGTGGAGTTACGACGG
CTCGAGGACCTTTCCGAGTCCATTGTTAATGACTTTGCCTACATGAAGAAGCGGGAAGAGGAGATGAGGG
ACACTAATGAGTCCACGAACACCCGGGTCCTGTACTTCAGCATCTTTTCCATGTTCTGCCTCATTGGACT
AGCCACCTGGCAGGTCTTCTACCTGCGTCGCTTCTTCAAGGCCAAGAAGTTGATAGAGTAATGAGGCTCA
GTGTTCTGTCCCCTAGAGCCAGCAGAACATCGCTGGGACATGCCTGGCCTAGCCCAAGGCCATTCTACTA
ACAGTACCATCAAGGCACAGCTGAGCTTTCTTGCCAGAACTGATACTTTTGGTATGAGAGCACATGGGCA
CCACCTATACCCAACAAGTCAATGAGGACTTTAATGCAGTAGGATTTGGACTGGTTTTGCAACAAGATTA
TTAAAGTCGCCTATGGAAAGAAAACAAAATAAAACAAAACAACAAACCGGGGTTACCTAGATAACGCCAA
AGCCAGCCTTCGTCCTGGGTCGCCCGCCTCACAGGATCTGTTTGAGCTGTTTGCTTTTTCTCTCCCACCT
GCTCATCGCCTTGTCCTTCACTCTAGTTCTCCTCCCAAGATTTCTCTGACTGCGGTCAGCTCTTTCATAT
CAGTTGTCTCTTTGGTTTCCTTGTGAAAACACCTTGAACTTCTCTTGGTCCTTAGATGAAATGTTTACAT
AGCTTCTGGTGATATCCTTCATAATTTTATGTCTCCTAAAAGGGTCATGGGTGGGACACATTAAAAGGTG
AGCTTTGAACTGTAGATAATCTCTTAAAAAAATCTCATTTTAGACCATTAAAATGTTTGTGCTCAAAAAA
AAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5349826 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5349826 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7006 same embryo
 EMAGE:7007 same embryo
 EMAGE:7009 same embryo
 EMAGE:7008 same embryo
 EMAGE:7011 same embryo
 EurExpress:euxassay_002551 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS