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EMAGE:7594

2610028H24Rik RIKEN cDNA 2610028H24 gene ( MGI:1924214)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594
"Pseudo-wholemount" of euxassay_004636. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004636_01 euxassay_004636_02 euxassay_004636_03 euxassay_004636_04
EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594
euxassay_004636_05 euxassay_004636_06 euxassay_004636_07 euxassay_004636_08 euxassay_004636_09
EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594
euxassay_004636_10 euxassay_004636_11 euxassay_004636_12 euxassay_004636_13 euxassay_004636_14
EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594 EMAGE:7594
euxassay_004636_15 euxassay_004636_16 euxassay_004636_17 euxassay_004636_18 euxassay_004636_19
EMAGE:7594 EMAGE:7594 EMAGE:7594
euxassay_004636_20 euxassay_004636_21 euxassay_004636_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7594Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7594_wholemount_strong.wlz
7594_wholemount_moderate.wlz
7594_wholemount_weak.wlz
7594_wholemount_possible.wlz
7594_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7594_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7710
Entity Detected:2610028H24Rik, RIKEN cDNA 2610028H24 gene ( MGI:1924214)
Sequence:sense strand is shown

>T7710
CTGTCTTGAGGCACCATGATCCCTGAGGGGGCTCTTTGTTATACATAACGAAGGGCCAAGGCAGAGTGAG
GACTTTCAGTCTCCTACTTCTCTGCAGGCCCCTTATTCAGTTGTCATGACGTTGGACTCCTCGATGGCAG
ATCAGATGACCCGGCTGAGGTTACAACTCCTGGAACAGATGCTGGAGCAGGAACGGGACAGCATGGACAG
AGCAGGACAGCAGGAAAAGTCAGACACAGCCCTCCAGAGTGCTTTGAGGAGAAGGAAGGACCTTCTACAG
AGACTCTGGGAGCAGCAGCTGATGGATGAGCACTCCCCAGCCCATGCCTGGAGGATGCATGGAAGAGCTG
CAGTGCCAACCCTGAACCCAGAGGTGCCTCCCACAGATGTCTTCCCTGCTGCCTCCCCACCTTTGCCCCG
ACCCCCAGAGCCACCAAGGATCATCCAGCACCCGGTCCCCCAGGCTCCTGCCACCATCATTCAGCAGCTA
CCGCAGCAGCAGCCACTGATTGCACAGATTTCTCCTCCTCAGGCCTTTCCCACTCCGAGGTCAGGAAGTA
TTAAGGAAGACATGGTGGAGATGATGCTGATGCAGAACGCGCAGATGCACCAGATTCTCATGCAGAACAT
GATGCTCAAAGCCCTGCCCCCTGGGTCCTCAGGCCCCCGTGCTGCTACCCTCCAGGACCAACGATGGATG
CACCACGGAGTCCCAAGAGCTGAAAAGCAGAAGCCACCCCCGGTTCACCACCACCACTACGCGCCCACCA
CTCAGCTGCCCGCTGCCTCCACGGCTGGCGCCCCTGCAGGTTATGCCATGTGGCCTCCAGTGGTCGCAGC
CACTGCGTTCCCACACGCAGCCAGCTTCTTGCCCACTGTGAGCCACCTGACCGAGGCATCGACCTCCCAT
CCTAGCTATCCTTAGCACACAAGTGTGGAGGGAGAAAGCTAGTGTCTTGCGGCAGAAGGAAGATATTTGG
CAGATGTTTTGTCTCAGATGGCCTGGCAATGCTGGGCTAACAAGGAGGAAGTAGCCTGGGAGCATCCTGG
CTCTGGGAGCACCATCAGCCTCTGGAAGCTATGGGAGTGTACATGGACCCACCCTCACACACAGTCTTCC
CCGTCCCTTTCAAGCCTGCTGTCTGAGGACCACCTGTGGGAGACTAAAGAGTCTGAGCAGGCCCTGTAGT
GGGCTTAGGGGGTCCCCAGTGACTCAGGGAAAAGCTTCTCCTGGCCATGCCCCTTAACAGTGGTGACAGG
GACTGCACCACTGTGCACAACTTTACTCTGAGAAGATGCACAGTACGCCCCAGAGATTTTAAAGATGGCT
CAAGTGTGTGAGCGGCCAATCCACAGAGTCCATGAAACTCTCATCAAGATCACAGGCCCCAGCTGGAGAG
ATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCTGAAGGTCGAGTTCAAATCCCAGAAACCACGCAGTG
GCTCACAACCATCTGTAATGAGATCTGACGCCCTCTTCTGGTTTATCTGAAGACAGCTACAGTGTACTTA
CATATAATTAATAAATCTTTGGGCTGGAGCGAGCAGGGCCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6308081 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6308081 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7593 same embryo
 EMAGE:7589 same embryo
 EMAGE:7592 same embryo
 EMAGE:7591 same embryo
 EMAGE:7590 same embryo
 EurExpress:euxassay_004636 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS