EMAGE mouse gene expression spatial database

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EMAGE:14651

Omg oligodendrocyte myelin glycoprotein ( MGI:106586)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_005570. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_005570_01	euxassay_005570_02	euxassay_005570_03	euxassay_005570_04

euxassay_005570_05	euxassay_005570_06	euxassay_005570_07	euxassay_005570_08	euxassay_005570_09

euxassay_005570_10	euxassay_005570_11	euxassay_005570_12	euxassay_005570_13	euxassay_005570_14

euxassay_005570_15	euxassay_005570_16	euxassay_005570_17	euxassay_005570_18	euxassay_005570_19

euxassay_005570_20	euxassay_005570_21	euxassay_005570_22	euxassay_005570_23	euxassay_005570_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

14651_wholemount_strong.wlz

14651_wholemount_moderate.wlz

14651_wholemount_weak.wlz

14651_wholemount_possible.wlz

14651_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:14651_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T5445
Entity Detected:	Omg, oligodendrocyte myelin glycoprotein ( MGI:106586)
Sequence:	sense strand is shown >T5445 CCACAACAAGACGACCTTTAAGCTGCAAGTTTCCCGGAGAAAATGAGATACTGATAGTGAAGACGACATT ATGGCTTTGATGGAATATCAGATACTGAAAATGTCTTCCTGCCTGTTCATCCTTCTGTTTCTCACGCCTG GCATCTTATGCATTTGTCCTCTCCAGTGTACATGCACAGAGAGGCACAGGCATGTGGACTGTTCAGGCAG AAACTTGACTACATTACCACCTGGACTGCAGGAGAACATTATACATTTAAACCTGTCTTATAACCACTTT ACTGATCTGCATAACCAGTTAACCCCATATACCAATCTGAGAACCCTGGATATTTCAAACAACAGGCTTG AAAGTCTGCCTGCTCAGTTACCTCGGTCTCTCTGGAACATGTCTGCTGCTAACAACAATATTAAACTTCT TGACAAATCTGATACTGCTTATCAGTGGAACCTTAAATACCTGGATGTTTCTAAGAATATGCTGGAAAAG GTTGTTCTCATTAAAAATACCCTAAGAAGTCTCGAGGTTCTTAACCTCAGCAGTAACAAGCTTTGGACAG TTCCAACCAACATGCCTTCCAAACTGCATATCGTGGACCTGTCTAATAACTCACTGACACAAATCCTTCC AGGGACATTAATAAACCTGACAAATCTCACACATCTTTACCTGCACAACAATAAATTCACATTCATTCCA GAACAGTCTTTTGACCAACTTTTGCAGTTGCAAGAGATAACTCTTCATAATAACAGGTGGTCATGTGACC ATAAACAAAACATTACTTACTTATTGAAGTGGGTGATGGAAACGAAAGCCCATGTGATAGGGACTCCTTG TTCTAAGCAAGTATCCTCTCTAAAGGAACAGAGCATGTACCCCACACCTCCTGGGTTTACCTCAAGCTTA TTTACTATGAGTGAGATGCAGACAGTGGACACCATTAACTCTTTGAGTATGGTAACTCAACCCAAAGTGA CCAAAACACCCAAACAATATCGAGGAAAGGAAACCACATTTGGTGTCACTCTAAGCAAAGATACCACTTT TAGTAGCACTGATAGGGCTGTGGTGGCCTACCCAGAAGACACACCCACAGAAATGACCAATTCCCATGAA GCAGCAGCTGCAACTCTAACTATTCACCTCCAGGATGGAATGAGTTCAAATGCAAGCCTCACCAGTGCAA CAAAGTCACCCCCAAGCCCCGTGACCCTCAGCATAGCTCGTGGCATGCCAAATAACTTCTCTGAAATGCC TCGACAAAGCACAACCCTCAACTTACGGAGGGAAGAAACCACTGCAAATGGAAACACTCGGCCACCTTCT GCGGCTAGTGCTTGGAAAGTAAATGCCTCGCTCCTTTTAATGCTCAATGCTGTGGTCATGCTGGCAGGCT GAGGGTCTGCAGTTTCTGAAACGAAGGAGAACCTTCCTCCATGATGTACAGTTGGGAAAACGTGCCCCTA TCTAACCAGTGATTCAAGCTATATTATGTATTCAAGAAAGCCAGTCTTATATTTCTGACTTTGATGTAAA TGAAGTAATTTGTCTTAATTAAAAGAAGTGCACAATGTCTTGGTACTTGCTGCTATTTTCCTGTCTTAAG TAAAACTAATGACTTTTTTTTTTAATGAAATGTTTTCTTTTTAAGGCTTCAACTTATTGCACAAACTATA AAGAGCATCTAAACTTTAATATGTATTTTATGTATGTTTACACTGTCAAATGTCTGGGACAAAATAAAAG GCCTATGCTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:5369312 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5369312 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:14649 same embryo
	EMAGE:14653 same embryo
	EMAGE:14650 same embryo
	EMAGE:14648 same embryo
	EMAGE:14652 same embryo
	EurExpress:euxassay_005570 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source