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EMAGE:17287

Impdh2 inosine 5'-phosphate dehydrogenase 2 ( MGI:109367)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287
"Pseudo-wholemount" of euxassay_003686. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003686_01 euxassay_003686_02 euxassay_003686_03 euxassay_003686_04
EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287
euxassay_003686_05 euxassay_003686_06 euxassay_003686_07 euxassay_003686_08 euxassay_003686_09
EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287
euxassay_003686_10 euxassay_003686_11 euxassay_003686_12 euxassay_003686_13 euxassay_003686_14
EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287 EMAGE:17287
euxassay_003686_15 euxassay_003686_16 euxassay_003686_17 euxassay_003686_18 euxassay_003686_19
EMAGE:17287
euxassay_003686_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17287Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17287_wholemount_strong.wlz
17287_wholemount_moderate.wlz
17287_wholemount_weak.wlz
17287_wholemount_possible.wlz
17287_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17287_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5701
Entity Detected:Impdh2, inosine 5'-phosphate dehydrogenase 2 ( MGI:109367)
Sequence:sense strand is shown

>T5701
CTCGGAGCCACGCGTCCGTCTTCCTCCGTGGTCATGGCGGACTACCTGATTAGCGGAGGCACCTCTTACG
TGCCGGACGACGGGCTCACAGCGCAGCAGCTCTTCAACTGCGGGGACGGCCTCACCTACAATGATTTTCT
CATTCTTCCTGGGTATATCGACTTCACTGCAGATCAGGTGGACTTGACGTCTGCTCTAACTAAGAAGATT
ACACTAAAGACCCCATTGGTTTCCTCACCCATGGACACTGTCACAGAGGCTGGAATGGCCATCGCGATGG
CGCTTACAGGAGGTATTGGTTTCATCCACCACAACTGCACACCTGAATTCCAGGCCAATGAAGTTCGGAA
AGTGAAGAAATACGAACAGGGATTCATCACTGACCCCGTGGTCCTTAGCCCCAAGGATCGTGTACGCGAT
GTTTTTGAGGCCAAAGCCAGGCATGGCTTCTGTGGTATCCCCATCACAGATACAGGCCGGATGGGGAGTC
GATTGGTGGGCATCATCTCCTCAAGGGACATTGATTTCCTCAAGGAGGAAGAGCATGACCGGTTCTTGGA
AGAGATCATGACTAAGAGGGAAGATTTGGTGGTCGCCCCTGCCGGCGTCACTCTGAAAGAGGCAAATGAG
ATTCTGCAGCGAAGTAAAAAGGGAAAGTTGCCCATTGTGAATGAAAATGATGAGCTGGTAGCCATCATTG
CCCGGACAGACCTAAAGAAGAATCGTGATTACCCCCTGGCCTCCAAAGATGCCAAGAAGCAACTGCTGTG
TGGGGCAGCCATTGGCACTCATGAGGATGACAAGTATAGGCTGGACTTACTGGCCCTTGCTGGTGTGGAT
GTAGTGGTTTTGGACTCTTCCCAGGGAAACTCCATCTTCCAAATCAATATGATCAAATACATCAAGGAGA
AGTATCCCAGTCTACAGGTCATTGGAGGCAATGTAGTCACTGCTGCGCAAGCCAAGAACCTCATAGATGC
AGGTGTAGATGCTTTGCGAGTCGGCATGGGAAGTGGTTCCATCTGCATCACCCAGGAAGTGTTGGCCTGT
GGGCGGCCCCAAGCCACAGCAGTGTACAAGGTCTCTGAATATGCCCGTCGCTTTGGTGTTCCTGTTATTG
CTGATGGAGGAATCCAAAATGTGGGTCATATTGCCAAAGCTTTGGCTCTTGGGGCTTCCACAGTCATGAT
GGGCTCCCTCCTGGCTGCCACCACTGAGGCCCCTGGCGAGTACTTCTTCTCAGATGGGATCCGGCTGAAG
AAATACCGAGGTATGGGTTCTCTTGATGCCATGGACAAACATCTCAGCAGCCAGAACCGATACTTCAGTG
AAGCTGACAAAATCAAAGTGGCCCAAGGAGTTTCAGGGGCAGTGCAGGACAAGGGGTCTATCCACAAGTT
CGTTCCTTACCTGATTGCTGGCATCCAGCATTCCTGTCAGGACATTGGTGCCAAGAGTTTAACCCAAGTC
AGAGCCATGATGTACTCGGGGGAGCTTAAATTTGAGAAGAGGACATCCTCTGCTCAGGTGGAAGGTGGCG
TCCACAGCCTCCATTCGTACGAGAAACGGCTTTTCTGAAAACAGATCCAGTATATGCCTTGAATTTTTCA
ATAAAAGTTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2646679 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2646679 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17288 same embryo
 EMAGE:17283 same embryo
 EMAGE:17286 same embryo
 EMAGE:17285 same embryo
 EMAGE:17284 same embryo
 EurExpress:euxassay_003686 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS