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EMAGE:19636

Ilvbl ilvB (bacterial acetolactate synthase)-like ( MGI:1351911)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636
"Pseudo-wholemount" of euxassay_005153. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005153_01 euxassay_005153_02 euxassay_005153_03 euxassay_005153_04
EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636
euxassay_005153_05 euxassay_005153_06 euxassay_005153_07 euxassay_005153_08 euxassay_005153_09
EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636
euxassay_005153_10 euxassay_005153_11 euxassay_005153_12 euxassay_005153_13 euxassay_005153_14
EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636 EMAGE:19636
euxassay_005153_15 euxassay_005153_16 euxassay_005153_17 euxassay_005153_18 euxassay_005153_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19636Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19636_wholemount_strong.wlz
19636_wholemount_moderate.wlz
19636_wholemount_weak.wlz
19636_wholemount_possible.wlz
19636_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19636_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8618
Entity Detected:Ilvbl, ilvB (bacterial acetolactate synthase)-like ( MGI:1351911)
Sequence:sense strand is shown

>T8618
AGTCAGGGACCTTTCCTATAGGCAAAGGTCATAGGGCCTTGTTTGGGGATGGGTGGAAGGGAGTTCTATG
TAGTGGAGCTGAAGGCGCATCCTATTGAAAAGTGACCTCGGCTGAAGGCCAAAGGTTCTGCCTCATGGAA
ACTTCTGCGGCCGCTGCATCTGCGGGAGGCTTCTTCCCCTCCTTCCTGCTCCTGGCGTTTGGGACGCTGG
TGGCTGCCGTGCTGGGCGTCGCTCACAGACTGGGGCTCTTCTATCAGCTGATGCACAAGGTGGACAAGAC
AAGCATCCGGCATGGTGGAGAGAGTGTCGCAGCTGTGCTCCGAGCCCATGGTGTACGCTTTGTCTTCACA
TTGGTCGGTGGGCACATTTCCCCACTGCTGGTGGCCTGTGAGAAGCTGGGTATCCGAGTGGTAGACACAC
GCCACGAGGTCACTGCTGTCTTTGCTGCTGATGCTGTGGCCCGCCTGACTGGGACAGTGGGTGTGGCAGC
AGTGACAGCCGGTCCTGGCCTCACCAACACTGTGACTGCAGTGAAGAATGCACAAGTGGCACAGTCCCCA
GTCCTGCTTTTGGGTGGAGCTGCCAGCACCCTGCTGCAGAAACGGGGCGCACTTCAGGCCATTGATCAGA
TGTCTCTGTTCAGGCCACTCTGCAAGTTTTGTGCTTCTGTGCGAAGGGTACGGGACATTGTACCTACCCT
GAGGACTGCAATAGCTGCTGCCCAGTCAGGCACCCCAGGTCCAGTGTTTGTGGAGCTGCCTCTTGATGTA
CTATATCCTTACTTCATGGTTGAGAAGGAGATGATACCAACCAAGTTGCCCAATAGCCTCATGGGCCGTG
TGGTTGTCTGGTATTTACAGAACTGCCTGGCCAACCTCTTTGTTGGGGCTTGGGAACCTCGTCCCGAGGG
ACCTCTGCCCTTGGATATTCCCCAGGCATCTCCGCAGCAGGTCCAGCGCTGTGTGGAGATCCTGAGCCGG
GCCAAGAGGCCTCTGCTGGTACTGGGGAGCCAGGCCTTGCTGCCCCCGACCCCTGCCAACAAGCTTAGAG
CTGCCGTGGAGACCCTGGGTGTCCCCTGCTTTCTAGGGGGGATGTCTCGGGGGCTGCTGGGCCGCAACCA
CCCTCTCCACATCCGGCAGAACCGCAGCGCTGCTCTGAAGAAAGCAGATGTTGTTGTCCTGGCAGGCGCT
GTGTGTGATTTCCGCCTGTCTTATGGCCGGGTCCTCAACCGCAAGAGCAGCATCATCATTGTCAACCGGA
ACCGGGATGATCTCTTGCTCAACTCGGACATCTTCTGGAAGCCTCAGGAGGCTGTGCAGGGAGATGTGGG
CTCCTTCATGATAAAACTGGTGGAAGGCCTTCAGGGCCAGATGTGGTCTTCAGATTGGGCTGAGGAGCTT
CGGAAAGCTGACCAGCAGAAGGAGCAGACCTATCGGGATAAGGCTTTAATGCCTGTATTACAGCACCTGA
ACCCAGTATGGGTGTTACAGCAGGTGGAGGAAACTCTGCCTGACAATGCACTTCTTGTGGTTGACGGAGG
GGACTTTGTGGCCACTGCTGCCTACTTAGTCCAGCCCAGAGGGCCTCTGCGCTGGCTCGATCCTGGGGCC
TTTGGGACTCTGGGAGTTGGCGCAGGTTTTGCACTTGGGGCCAAGCTGTGTCAGCCGGAGGCTGAGGTTT
GGTGCCTGTTTGGGGATGGAGCCTTTGGCTACAGCCTCATTGAGTTTGACACGTTCGTCAGACATAAGGT
ACCAGTGATAGCCTTGGTAGGAAACGATGCAGGTTGGACCCAGATTTCTCGAGAGCAGGTGCCCAGGTTG
GGCAGTGATGTAGCCTGTAGCCTGGCTTACACTGATTATCACAAGGCAGCCATGGGCCTGGGGGCCCAGG
GATTGATACTCTCACGGGACAATAAGGATCAAGTGGTCAAGGTACTTCGTGAAGGCCAGCAGCTGTGCCA
GGATGGTCATGCAGTTGTGGTCAACATCCTGATTGGGAGGACAGACTTCCGAGATGGCTCCATTTCTGTA
TAGGGACTATCCAGGGTTAGTGTGCTTGCCTCTTTGGACCAGGACTTTGTCTACCTGGAGTTTTCATCCT
TGCCTGTCCTGAGCTTGTCTCATAAGGTCTAACCCTCTAAGTGGGGAATGTGGGGGTGGGGAACCAAAGC
TCAAAGAGGCACCTTGGCAACCCTGGGTAGCTCTTTCCAAAAGGTTCAGCTGTACCCTCTCTCTTACAAA
ATTAATAAATCTCTTGGCTATATGAGCCCAAGGACTCAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5718157 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5718157 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19638 same embryo
 EMAGE:19635 same embryo
 EMAGE:19634 same embryo
 EMAGE:19639 same embryo
 EMAGE:19637 same embryo
 EurExpress:euxassay_005153 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS