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EMAGE:31935

Car8 ( MGI:88253)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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euxassay_018929_16 euxassay_018929_17 euxassay_018929_18 euxassay_018929_19 euxassay_018929_20
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euxassay_018929_21 euxassay_018929_22 euxassay_018929_23 euxassay_018929_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
olfactory cortex ventricular layer
weak weak
regionalweak expression: see section 10 11 12 14 15
stomach
strong strong
regionalstrong expression: see section 08 09 10 moderate expression: see section 06 07 weak expression: see section 05
metanephros
weak weak
regionalweak expression: see section 09 10 11 12 16 17 18 19 20
clavicle
strong strong
regionalstrong expression: see section 16 weak expression: see section 12 17
rest of cerebellum mantle layer
strong strong
regionalstrong expression: see section 04 06 07 08 09 10 11 12 15 16 moderate expression: see section 05 17 18 19 21 22
midgut
strong strong
regionalstrong expression: see section 08 09 10 11 12 13 14 15 16
thyroid gland
moderate moderate
regionalmoderate expression: see section 12 weak expression: see section 16
hypothalamus mantle layer
weak weak
regionalweak expression: see section 09 10 11
pancreas
weak weak
regionalweak expression: see section 10 11 12
submandibular gland primordium
moderate moderate
regionalmoderate expression: see section 08 09 10 11 12 16 18 19 weak expression: see section 17
telencephalon ventricular layer
weak weak
regionalweak expression: see section 01 02 03 04 05 08 16 18 22
diencephalon lateral wall mantle layer
weak weak
regionalweak expression: see section 12 14 15
lung
weak weak
regionalweak expression: see section 05 06 07 08 09 10 11 12 14 15 16 17 18 19 20 21 22
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50187
Entity Detected:Car8, ( MGI:88253)
Sequence:sense strand is shown

>T50187
TGTCTCCAAATTATGTGGTGTGCCGGGACTGTGAAGTCACCAACGATGGACACACCATTCAAGTCATCCT
GAAGTCAAAATCAGTCTTGTCAGGAGGACCACTGCCTCAGGGACAGGAGTTTGAGCTGTATGAAGTTAGA
TTTCACTGGGGAAGAGAAAACCAGCGTGGTTCTGAGCACACGGTCAATTTCAAAGCCTTTCCCATGGAGC
TCCACCTGATCCACTGGAATTCCACACTGTTTGGCAGCATCGATGAGGCGGTTGGGAAACCCCATGGTAT
CGCCATCATTGCACTATTTGTTCAGATCGGGAAGGAACATGTTGGCTTGAAGGCTGTGACTGAGATCCTC
CAGGATATTCAATATAAGGGAAAATCCAAAACAATTCCATGCTTTAATCCTAACACTTTATTACCAGACC
CTCTTCTGCGGGATTACTGGGTCTATGAAGGATCTCTTACTATCCCACCTTGCAGCGAAGGAGTTACCTG
GATATTATTCCGATACCCTTTAACTATATCCCAGATGCAGATAGAAGAATTTCGAAGGCTGAGGACACAT
GTCAAGGGGGTAGAACTGGTGGAGGGCTGCGATGGGATTTTGGGAGACAATTTCCGACCTACCCAGCCCC
TGAGTGATAGAGTCATCCGAGCGGCCTTCAGTAGCCAGAGAGACCGGGAACAAACCCATCTGCATCAGTG
AAGAAGACAGTGGTCCCACGGAGTCCTTTGATGAGGAGTGGAAACTCCTGAGTGGCAGCTTTGTTTTAAC
CCTCAAGCCTGCAGATAGAAGAATTTCGAAGGCTGAGGACACATGTCAAGGGGGCAGAACTGGTGGAGGG
CTGCGATGGGATTTTGGGAGACAATTTCCGACCTA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_018929 same experiment
 EMAGE:29318 same embryo
 EMAGE:31904 same embryo
 EMAGE:31004 same embryo
 EMAGE:31045 same embryo
 EMAGE:31940 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS