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EMAGE:17104

Usp46 ubiquitin specific peptidase 46 ( MGI:1916977)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104
euxassay_001500_01 euxassay_001500_02 euxassay_001500_03 euxassay_001500_04 euxassay_001500_05
EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104
euxassay_001500_06 euxassay_001500_07 euxassay_001500_08 euxassay_001500_09 euxassay_001500_10
EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104
euxassay_001500_11 euxassay_001500_12 euxassay_001500_13 euxassay_001500_14 euxassay_001500_15
EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104 EMAGE:17104
euxassay_001500_16 euxassay_001500_17 euxassay_001500_18 euxassay_001500_19 euxassay_001500_20
EMAGE:17104 EMAGE:17104
euxassay_001500_21 euxassay_001500_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17104Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17104_wholemount_strong.wlz
17104_wholemount_moderate.wlz
17104_wholemount_weak.wlz
17104_wholemount_possible.wlz
17104_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17104_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4481
Entity Detected:Usp46, ubiquitin specific peptidase 46 ( MGI:1916977)
Sequence:sense strand is shown

>T4481
CCACGCGTCCGCTGCAAGCCGGCCCCAGGCCGCCTCGCCGCCACCCGGCCTCGCTGCGCGCCACCATGGA
CAGTCCCGTTTTCCCCTGGTAAAGATGGCGGTGCGCGATCGCTGCAACCTTTAGACTAATGACTGTCCGA
AACATCGCCTCCATCTGTAATATGGGCACCAATGCCTCTGCTCTGGAAAAAGACATTGGACCAGAGCAGT
TTCCGATCAATGAACACTACTTCGGATTGGTCAATTTTGGAAACACATGCTACTGTAACTCCGTGCTTCA
AGCGCTGTACTTCTGCCGGCCGTTCCGGGAGAATGTGTTGGCATACAAGGCCCAGCAAAAAAAGAAGGAA
AACCTGTTGACATGCCTGGCAGACCTTTTCCACAGCATTGCCACGCAGAAGAAGAAGGTTGGCGTCATCC
CACCAAAGAAGTTCATTTCAAGGCTGAGGAAAGAGAACGATCTCTTTGATAACTACATGCAGCAGGATGC
TCACGAGTTCTTAAATTATTTGCTAAACACTATTGCGGACATCCTGCAGGAAGAGAAGAAACAGGAAAAA
CAAAACGGGAAGTTAAAAAACGGCAACATGAACGAACCAGCCGAGAACAATAAGCCAGAACTCACCTGGG
TCCACGAGATTTTTCAGGGAACACTCACTAACGAAACTCGATGCTTGAACTGTGAAACTGTGAGTAGCAA
AGATGAAGATTTTCTTGACCTCTCTGTCGATGTGGAACAGAACACCTCCATCACCCACTGTCTGAGAGAC
TTCAGCAACACAGAAACGCTGTGTAGTGAACAAAAATATTATTGTGAAACATGTTGCAGCAAACAGGAGG
CTCAGAAGAGGATGAGGGTAAAAAAGCTGCCCATGATTTTGGCCCTGCACCTCAAGAGGTTCAAGTACAT
GGAACAGCTCCACAGGTACACCAAGCTGTCTTACCGGGTGGTCTTCCCTCTGGAACTCCGGCTCTTCAAC
ACCTCCAGCGATGCTGTGAACCTGGACCGCATGTATGACCTGGTTGCTGTGGTCGTTCACTGTGGAAGTG
GTCCTAACCGTGGGCATTACATCACCATCGTAAAAAGTCATGGCTTCTGGCTGTTGTTTGATGACGACAT
TGTAGAGAAAATAGACGCTCAAGCCATTGAGGAATTCTATGGTCTAACGTCAGATATATCAAAAAATTCA
GAATCTGGATATATTTTATTCTATCAATCAAGAGAATAACTTGGTGGAGTGCGAGACTCATTCAAGCAGG
GAAATACTCCAAGCACTAGAGCCGTGGTTTCTCTGCAGACCTCTCCTCCCCCACAATGGCCCGCTGATGT
CATCACTATGATGGGCACTGGTCCGGCAGTGTTAAACTTCCTTCCTTTGTGTTTTTTACATGCAGCACTA
CTCCTGACTCTGTTTTGGTCTGAGGTAGAGTTAACTGCAGTCGGATTATATAGTCAGATTTACATGAATA
ACTGTTGCTAATTTTAAGATTGGAGTTGAATGGTTAATGCCGCTTGTCACGTCTGGCTAAACTAGAGTGA
TATTTCCTGTAAATGTCACGGTCCATACTGAGTGTTTGGTAGGCTTCCTGAATGGTTTCTGGGGGCCCCC
TTCCCATGCATTCCTTTGACAGGTCCCTGGAAGCATTGCTACCCGTTGTTAGCATGCCTGCCTCCTCTGA
TGGGAGGAGTTGGGTAGATAGATATTCATCTGTTAGGGCTGCAACCATAGCTTTAAGTTTGTGCAAGTGA
AAATGTTTAAAAGTGAGTGGCCTAGATGCCAAAATCCTCCTCCACATTGGAGCAAGGTGAGGTAAGGCTG
TCATTGGTAGATGGCGTTTGCACCCAACTGTGCTTACCTAGCTGGTAGAATCCCAGGGGCTAAGACATTT
TGGAGCTCAGGGCAGGCAAAGCCAAAAGGAAGATGTTTTTGTGGTCAGTGAGAAGTTACTTACCTTTCTA
CCAAAAGCCACGTTTCTGGAAAATAGCTCGATGCTGTTCATTTTTTAGGAATGATTTTCTTCCATCAGGT
CCTGTAGTTGTCTTCTTCTCATGTTTGGTACCGCTAAGCTTTTCAAACTGTCTTTTCAACCCTGCTGATG
GTTTTTAGTCAGTGGCACCAGGGCTGAGACGGTAGCTGACCGCCTCTGGCAGGGTTCTCGATAGCCAGTC
AACATCAGCATCGTTCCTAGATGAGGAAGACGAGGAATCAAGAACTCTGTTCACCTGGACAACCATCAGC
AGATTGAACAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAC
ATTCAGTCTATTTATGGAGGCACTGGTGAGTTTTGCTGGAGTTAGTGCAGTGTGAGGTGGGTCACAGGAA
GTGTTAGGAGGTGGGTGGAGAGGTAAGATGGTGGCTCAGATTCCTAGAATGCTTGACAAGACAGTTTCCA
GGAAGAACCTTATCTCACCGTTTCCCCCTTTTGTTTTGTGTGTATTTATTAGAGCATTTGCATACTGGTA
CCTTTTATTAAAAGGGTTGATTTGGTGTTTTACCATTGAATGGGTCTTGGTTTTCCTACAAATACTATGG
GTCATAGTCCTTGGCTTCCTTTTGGGATGTCAGTTGACTTCTACACACGTTAATATACTGTGAATGTGTT
ACGTTGCGACGTACTACGTCAGCGAATGAACATGCAAACTCGTGGTGTAATGTGAACTCAAACTGCAGTT
GAAATCATCAGTGGCCATCGTGCAGCAGTGAAGAGGATAGCACTTTATCTAGGTGAAAACTGGACTCCTT
ATTTCTGAAATATCTTGAATTGTTTGTGACTCGGAACTTCAGCATGCCAACGCTTCATTTGTTCACGCTT
CAAGGGACATGTCTCATTCTTCACTGGAGCAGACAAAACAGGGTTATGTCATGTTACTCTCTTATGCAAG
TGACAAAAATGGACCTTGCCTTGGTTAGAGGCAATGCATATTTATAAATATTTTTTCTTTATTTCCCCCT
CCATGAAGCATATTTATTAATCACTTACATGGATGGTGAACCTTCATTCTTTAAGGAGAGGCACTTTTCC
AAGTGTAAGGGATTGATGGCCTGAGATATTTGTATACATACAGCCATATACTTCACTGTGGGTTACAAAG
GTTAAAAAAATGGCTACTGGTCTCTAATATATTTGGAACTCATCATAGAACAAAAACTATTAAAACTATC
TTTGAAACAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4950034 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4950034 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17105 same embryo
 EMAGE:17101 same embryo
 EMAGE:17103 same embryo
 EMAGE:17102 same embryo
 EMAGE:17100 same embryo
 EurExpress:euxassay_001500 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS