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EMAGE:17264

Isoc1 isochorismatase domain containing 1 ( MGI:1913557)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264
euxassay_001648_01 euxassay_001648_02 euxassay_001648_03 euxassay_001648_04 euxassay_001648_05
EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264
euxassay_001648_06 euxassay_001648_07 euxassay_001648_08 euxassay_001648_09 euxassay_001648_10
EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264
euxassay_001648_11 euxassay_001648_12 euxassay_001648_13 euxassay_001648_14 euxassay_001648_15
EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264 EMAGE:17264
euxassay_001648_16 euxassay_001648_17 euxassay_001648_18 euxassay_001648_19 euxassay_001648_20
EMAGE:17264 EMAGE:17264
euxassay_001648_21 euxassay_001648_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17264Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17264_wholemount_strong.wlz
17264_wholemount_moderate.wlz
17264_wholemount_weak.wlz
17264_wholemount_possible.wlz
17264_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17264_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5677
Entity Detected:Isoc1, isochorismatase domain containing 1 ( MGI:1913557)
Sequence:sense strand is shown

>T5677
GCGCACGCGCGGGGAACATGGCGGCGGCGGAGCCCTCGGTGGCCGCGCTGGCGGGCGGCGGTGTGGGCGC
GGGGGCGCCGTCGGGCGGCGTGCCGGTGCTCTTCTGCTTCTCGGTGTTCGCGCGGCCCGCGTCGGTGCCC
CACGGCGCGGGCTACGACGTGCTCATCCAGAAGTTCCTGAGCCTGTACGGCGATCAGCTCGACATGCACC
GCAAATTCGTGGTGCAGCTCTTCGCCGAGGAGTGGGGTCAGTACGTGGACCTGCCCAAGGGCTTCGCGGT
GAGCGAGCGCTGCAAGCTGCGCCTGGTGCCGCTGCAGATCCAGCTTACGACCCTGGGAAATCTCACACCT
CCGAGCACTGTGTTTTTCTGCTGTGACATGCAGGAAAGGTTCCGTCCAGCCATCAAATACTTTGGGGACA
TCATTAGTGTGGGACAGAGACTGTTGCAAGGAGCTCGGATCTTAGGGATTCCAGTTATCATAACGGAACA
ATACCCCAAAGGACTTGGCAGCACCGTTCAAGAAATCGACTTAACAGGTGTGAAACTGGTTCTTCCAAAG
ACCAAGTTTTCTATGGTGTTACCTGAAGTCGAAGCAGCGTTAGCCGAGATTCCTGGCGTCCGGAGTGTCG
TGTTGTTTGGAGTAGAAACGCACGTGTGTATCCAGCAAACTGCCCTGGAGCTGGTCGGCCGAGGCATCGA
GGTTCACATCGTCGCGGATGCCACCTCCTCGAGAAGCATGATGGACAGGATGTTTGCTCTTGAGCGTCTT
GCTCGCACTGGGATCATCGTGACCACTAGTGAGGCTGTCCTCCTACAGCTGGTGGCTGACAAAGACCACC
CGAAGTTCAAGGAAATTCAGAACCTAATTAAGGCGAGTGCCCCGGAGTCGGGTCTGCTTTCTAAAGTGTA
GGAGACTTGAAGGATCAGGGTCCTCCTTCCCTCCAGGCGATGAGACTGCAAACCACACAAGCCCTTGTCT
CCACTAGAACTACTATGTTAAGTCAACAGCTCCTTCTTTGCGGCTCTTAGTAACCCTTACCTGGCTAGAC
CGTTGTGTACAAGTGTTTAGTTCCAATGTCGAGGCTTCAGGTGCTGCTTCTCTTCTTCTTAACGAGCTTT
TAGTTATTAAGACAAATTACCATGGAGGTGCCTGTCTCGTCTATACTGCATACTCTGACCATATCTTTCC
AAAGTGCACCCTCTGGTGAAGTATTCTTAAATTGTGCACTTTAATGGGAGAAAAACAAAACAAAAAAAAA
AAAAAA
Notes:The probe template was PCR amplified from IMAGE:2609919 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2609919 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17258 same embryo
 EMAGE:17262 same embryo
 EMAGE:17259 same embryo
 EMAGE:17260 same embryo
 EMAGE:17261 same embryo
 EMAGE:17263 same embryo
 EurExpress:euxassay_001648 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS