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EMAGE:19474

Actg2 actin, gamma 2, smooth muscle, enteric ( MGI:104589)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474
"Pseudo-wholemount" of euxassay_004848. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004848_01 euxassay_004848_02 euxassay_004848_03 euxassay_004848_04
EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474
euxassay_004848_05 euxassay_004848_06 euxassay_004848_07 euxassay_004848_08 euxassay_004848_09
EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474
euxassay_004848_10 euxassay_004848_11 euxassay_004848_12 euxassay_004848_13 euxassay_004848_14
EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474 EMAGE:19474
euxassay_004848_15 euxassay_004848_16 euxassay_004848_17 euxassay_004848_18 euxassay_004848_19
EMAGE:19474 EMAGE:19474 EMAGE:19474
euxassay_004848_20 euxassay_004848_21 euxassay_004848_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19474Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19474_wholemount_strong.wlz
19474_wholemount_moderate.wlz
19474_wholemount_weak.wlz
19474_wholemount_possible.wlz
19474_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19474_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6540
Entity Detected:Actg2, actin, gamma 2, smooth muscle, enteric ( MGI:104589)
Sequence:sense strand is shown

>T6540
GCCAAAGACACCACGGCCCTCAGTCTCTCGGAGAAGGACTTCTCACACCCTTGGTGCTCCAGCCCCCAGC
TCATTCCACCGCTCCCACCATGTGTGAAGAAGAGACCACCGCCCTTGTGTGTGACAATGGCTCTGGCCTG
TGCAAGGCAGGCTTTGCAGGAGATGATGCCCCCAGGGCTGTCTTCCCCTCCATTGTGGGCCGCCCTAGAC
ATCAGGGTGTGATGGTGGGAATGGGCCAGAAAGACAGCTATGTGGGGGACGAGGCTCAGAGCAAGCGTGG
GATCCTAACTCTCAAGTACCCTATTGAACATGGCATCATCACCAACTGGGATGACATGGAGAAGATCTGG
CACCACTCCTTCTACAATGAGCTTCGAGTAGCACCAGAAGAGCACCCCACCCTGCTCACAGAGGCCCCCC
TAAACCCCAAAGCAAACAGGGAGAAGATGACCCAGATCATGTTCGAAACCTTCAATGTCCCTGCCATGTA
TGTTGCTATTCAGGCTGTGCTCTCACTCTATGCATCCGGCCGTACCACAGGCATCGTCCTGGATTCGGGG
GATGGCGTCACCCACAATGTCCCCATCTATGAGGGCTATGCACTGCCCCATGCCATCATGCGTCTTGACC
TGGCTGGACGGGATCTCACAGACTACCTCATGAAGATTCTCACAGAAAGAGGCTATTCCTTTGTGACCAC
AGCTGAGAGAGAAATTGTACGAGACATCAAGGAGAAGCTGTGCTATGTAGCCCTGGATTTCGAGAATGAG
ATGGCCACAGCAGCTTCATCTTCTTCCCTGGAGAAAAGCTACGAGTTGCCTGATGGGCAGGTCATCACTA
TTGGCAACGAACGCTTCCGCTGCCCGGAGACCCTCTTCCAGCCTTCCTTCATTGGCATGGAGTCAGCTGG
AATTCATGAAACAACATACAATTCCATCATGAAGTGTGACATTGACATCCGCAAAGATTTGTATGCTAAC
AATGTCCTCTCTGGGGGCACTACCATGTACCCTGGCATTGCTGACAGGATGCAGAAGGAAATCACAGCCT
TGGCTCCCAGCACCATGAAGATCAAGATTATCGCTCCTCCTGAGCGGAAGTACTCAGTCTGGATTGGCGG
CTCCATCCTGGCCTCTCTCTCCACCTTCCAGCAAATGTGGATCAGCAAGCCAGAGTATGATGAGGCAGGG
CCCTCCATTGTCCACAGGAAATGCTTCTAAAGTCAGAGGGCCTTCTCTGGGGATCCCCACAAGACTGCTG
TCACCAGCCACAGATCATTAAAACCTTCAAGCCTTAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3591323 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3591323 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19470 same embryo
 EMAGE:19472 same embryo
 EMAGE:19473 same embryo
 EMAGE:19471 same embryo
 EurExpress:euxassay_004848 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS