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EMAGE:19540

Zbtb25 zinc finger and BTB domain containing 25 ( MGI:99197)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540
"Pseudo-wholemount" of euxassay_004975. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004975_01 euxassay_004975_02 euxassay_004975_03 euxassay_004975_04
EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540
euxassay_004975_05 euxassay_004975_06 euxassay_004975_07 euxassay_004975_08 euxassay_004975_09
EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540
euxassay_004975_10 euxassay_004975_11 euxassay_004975_12 euxassay_004975_13 euxassay_004975_14
EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540
euxassay_004975_15 euxassay_004975_16 euxassay_004975_17 euxassay_004975_18 euxassay_004975_19
EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540 EMAGE:19540
euxassay_004975_20 euxassay_004975_21 euxassay_004975_22 euxassay_004975_23 euxassay_004975_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19540Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19540_wholemount_strong.wlz
19540_wholemount_moderate.wlz
19540_wholemount_weak.wlz
19540_wholemount_possible.wlz
19540_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19540_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8015
Entity Detected:Zbtb25, zinc finger and BTB domain containing 25 ( MGI:99197)
Sequence:sense strand is shown

>T8015
CGACAAGAGGTAATCCGTGAGTACCTAGCATCTAGGGCAAGTAGCCCCCTACCCTAATAATTAATTTTTC
TCTTAGCCCAGTGGTTTTTCATTTTGAATTCTGGCCCCCATCTTATATCATCGTCTCCCTAGCACTCATT
TGGAGGAATCAAGCCGTTATCAGTTGCTTAGAGCCGCCATGGATACTGCTAGCCATAGCCTTGTGCTTCT
GCAGCAGCTGAACATGCAGCGAGAATTCGGCTTTCTGTGTGACTGCACAGTTGCTATTGGGGATGTTTAC
TTCAAAGCCCACAGAGCAGTGCTTGCTGCCTTTTCTAACTACTTCAAGATGATTTTTATTCACCAAACAA
GGAAAAGGGCCAAAACAGATTGTGGATCATAGTCGTTTGGAGGAAGGGATCCGATTTCTTCACGCTGACT
ACCTTTCTCACATTGCAACTGAAATGAATCAAGTGTTCTCACCAGAGACTGTGCAGACATCTAATTTGTA
TGGTATTCAGATTTCAACAACCCAGAAAACAGCTGTCAAACAAGGGCTGGAGATCAAAGAAACTCCTCCC
AGTAGCAGTGGAAACAGAGCTGCTGTCCCAGGTGACCACCCCCAGCTGCAGCTCTCTCTGGCAATTGGGC
TAGATGATGGCAGCGGTGCGGAGCAGCAGAGGACCCATCCTGCTGCCCAGGCCGTGGAGGAGCACCAGAA
GCCCCCAGTGTCCATCAAGCAGGAGAGATGTGATCCAGAGTCTGTGATCTCCCAAAGCCACTCCTCATCC
TCATCAGAGGTGACTGGCCCCTCTTTTACAGAAAACAGTATCAAAGTCCACTTATGCCATTACTGTGGGG
AGCGCTTTGAATCCCGAAGTAACCTGAGACAACACCTCCATACCCACGTGTCCAGATCTCTCCCGTTCGG
TGTCCCTGCTTCCATTTTGGAAAGTAATGACCTTGGTGAAGTGCATCCACTTAGTGACAGCAGTGAGGCT
CTTGAATGCCGGAGGCTCAGCTCCTTCATTGTCAAGGAGAATGAGCAGCAGCAGCCATCACCTGAGCACT
CGAGCCGAGGCACCTCAGAGCCTTTGCAGATTAGTCAAGTATCTTTGATCTCCAAAGACACAGAGCCAGT
AGAATTAAACTGTAATTTTTCTTTTTCAAGGAAAAGAAAAATCAGTTGTACCATCTGTGGTCATAAATTT
CTTCGAAAGAGCCAGTTACTGGAACACATGTATACACACAAAGGTAAATCCTACAGATATAACCGTTGCC
AAAGGTTTGGAAACTCATTGGCCCAGAGGTTTCAGCAGTATTGTGACAGCTGGCCCGATGTCCCCTTAAA
AAGCTCTCGCTTGTCACAAGAACATTTAGACTTGCCTTGTGCCTTAGAGTCAGAGCTCACACAAGCGGGT
GTGGACACCATCCTCGTTGAGTAGCAGCTTCTCGGGCAGAACTTTTATACTGATCTTGGAGGAGATTTAC
ACGCCATTTCTAATCATAAATTAGTTAGTTAGCTCCTCATGGTCTTTTGACTTAAAATATTATCTGTTGT
GTGTTTTGAGGTTGAACAAACCAGTTCTCATTATAAGACATGGCTATTAAACATAACTTTCAAATTAAAA
AAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30014013 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30014013 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19539 same embryo
 EMAGE:19542 same embryo
 EMAGE:19538 same embryo
 EMAGE:19543 same embryo
 EMAGE:19541 same embryo
 EurExpress:euxassay_004975 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS