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EMAGE:29254

4930563C04Rik ( MGI:1922523)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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euxassay_005599_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4115
Entity Detected:4930563C04Rik, ( MGI:1922523)
Sequence:sense strand is shown

>T4115
GGAAGTCGACTTTTGCGTTTTGGTGCCCTGATCAGCCGGCTGCTTCCCCAGGTTCTCAATGCCTGGAGCA
CTGGGAGGGATACTCTAGCTCCAGGCCAGGAGAGGCCTTACAGCACCATTCGGACCAAAGTGTATGCTAT
CTTAGAGCTATGGGTGCAGGTTTGTGGGGCCTCAGCAGGTATGCTTCAGGGAGGAGCCTCTGGAGAAGCC
TTGCTCACCCACCTGCTCAGTGACATCTCCCCTCCAGCTGATGCTCTTAAGCTATGCAGTACCAGGGGAA
GCTCTGATGGAGGTTTGCAAAGTGGGAAGCCAAGTGCTCCTAAGAAGCTCAAGCTCGATATGGGGGAAGC
TTTGGCTCCACCCAGCCAAAGGAAAGGAGATAGGAATGCCAACAGTGACGTGTGCGCAGCTGCACTGAGA
GGCCTCAGTCGGACCATCCTTATGTGCGGGCCTCTCATCAAGGAGGAGACTCACAGGAGACTTCATGATC
TAGTCCTGCCCCTGGTCATGAGTGTCCAGCAGGGTGAGGTCCCGGGCAGCTCTCCTTACAACAGTTCCTG
CTGTCGCCTCGGGCTCTACCGCCTGCTGCTGGCTTTATTGCTGGCACCTTCCCCTCGGTGCCCTCCTCCT
CTTGCCTGTGCCCTGAAAGCTTTCTCTCTTGGCCAATGGGAAGATAGTCTTGAGGTCTCCTCTTTTTGCT
CAGAAGCTCTGGTGACCTGTGCTGCTCTGACACACCCCCGAGTACCTCCTCTACAGAGCTCAGGCCCTGC
CTGCCCCACTCCTGCCCCCGTCCCTCCTCCTGAGGCCCCATCTTCATTCAGGGCCCCGGCCTTCCATCCT
CCAGGCCCCATGCCCTCCATAGGTGCTGTGCCATCCACAGGCCCATTACCCTCAGCAGGCCCCATTCCCA
CAGTAGGCTCTATGGCGTCCACAGGCCAAGTGCCCTCTCGCCCTGGACCTCCAGCAACAGCCAACCATTT
AGGCCTCTCTGTCCCAGGCCTGGTATCTGTTCCACCCAGGCTCCTTCCTGGCCCTGAAAACCACCGTGCA
GGCTCCGGTGAGGATCCTGTCCTTGCTCCTAGTGGGACCCCTCCGCCTAGCATACCTCCAGATGAAACTT
TTGGGGGGAGAGTACCTAGGCCAGCCTTTGTCCACTACGATAAGGAGGAGGCATCTGATGTAGAGATCTC
CTTGGAAAGCGACTCTGATGACAGTGTGGTGATTGTACCTGAGGGGCTTCCCTCCCTGCCACCTGCACCA
CCCTCAGGCACTCCTCCCCCTGCGGCTCCTGCCGGCCCACCAACAGCCTCACCTCCTGTGCCAGCTAAGG
AGGATTCTGAAGAACTGCCTGCAACCCCAGGGCCTCCACCCCCACCCCCACCCCCACCCCCACCGGCCTC
TGGTCCTGTGACACTTCCTCCACCCCAGCTGGTCCCTGAAGGGACTCCTGGAGGGGGAGGACCCACAGCC
ATGGAAGAAGATTTGACAGTTATTAATATCAACAGCAGTGATGAAGAGGAGGAGGAGGAAGAGGAAGAGG
AGGAAGAAGATGAAGATGAGGAAGAAGAAGACTTTGAGGAAGAGGAAGAAGATGAAGAAGAATATTTTGA
AGAGGAAGAAGAGGAAGAAGAGTTTGAGGAGGAATTTGAGGAGGAAGAAGGTGAATTAGAAGAGGAAGAA
GAAGAGGAGGAAGAAGAGTTAGATGAGGTAGAAGATGTGGAGTTTGGTTCAGCAGGGGAGGTGGAAGAAG
GTGGACCTCCACCCCCAACACTGCCACCTGCTCTGCCACCTTCAGACTCGCCCAAAGTACAGCCTGAGGC
AGAACCTGAACCTGGGCTCTTATTGGAAGTTGAGGAGCCAGGGCCAGAGGAGGTGCCTGGGCCTGAGACT
GCTCCTACCCTGGCCCCTGAAGTGCTCCCCTCCCAGGAGGAGGGGGAGCAGGAAGTGGGAAGCCCTGCAG
CAGGGCCACCTCAGGAGCTTGTTGAAGAGTCCTCTGCTCCCCCTGCCCTGCTGGAAGAGGGGACTGAGGG
TGGAGGTGACAAAGTGCCACCCCCACCGGAGACACCTGCAGAAGAAATGGAGACAGAAGCAGAAGTTCCA
GCTCCTCAGGAAAAGGAGCAAGATGATACAGCTGCCATGCTGGCTGATTTCATCGATTGTCCCCCTGACG
ATGAGAAGCCACCACCTGCTACAGAGCCTGACTCGTAGCCCCTTCTGCACCCCGTCACTTTGTATCCAAT
AAAGTTCTGTCTGTAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4459875 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4459875 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_005599 same experiment
 EMAGE:31351 same embryo
 EMAGE:31906 same embryo
 EMAGE:30925 same embryo
 EMAGE:31961 same embryo
 EMAGE:30907 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS