Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:30647

Serpinb9e ( MGI:894672)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30647
euxassay_004968_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8005
Entity Detected:Serpinb9e, ( MGI:894672)
Sequence:sense strand is shown

>T8005
CCAGGGTCAGAGACCATTGAACACTGCACCGTGAGATCAGAAATATTGGAGACACTGCATCATGAATACT
CTGTCTCAAGCCAATGGCACCTTTGCCATCCATCTTTTGAAGGTGCTCTGTCAAGACAACCCTTCAGAAA
ATGTGTGTTATTCTCCTATGAGCATCTCCTCTGCTCTAGCCATGGTTCTCTTGGGTGCAAAGGGAGACAC
TGCAGTCCAGATATGTCAGGCACTTCATTTAAACCCAGATGAAGATGTCCATCAGGGCTTCCAGTTGCTT
CTCCATAACCTGAACAAGCCAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGGCTCTTTGTAGAAA
ATACTTGTGAATTACTTCCAACATTTAAAAAGTCCTGTCTTAAATTCTATCACTCTGAGATTGAGCAGCT
CTCTTTTGCCGAAGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAAAGGT
AAAATTCCAGACTTATTGTCAGAAGACTCAGTTGATTCACAGACCAGGCTAATTCCCGCCAATGCTTTAT
ACTTCCAAGGAACATGGTGTAAATTCTTTGAAAAAGATAGCACCAAGGAAGTGCCCTTTAAGATAAATAA
GAAGGAAACAAGGCCAGTGCAGATGATGTGGCAGGAAGACACATTTTTCCATGCCTATGTGAAGGAAATC
CAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAATTTCGTGGTCCTACTCCCAGATCAGG
GTGTGGACATCAGCAAGGTGGAAAACAATCTCACCTTTGAGAAGTTAACAGCCTGGACCAAACCAGAGTT
TATGAATCGCACTGAGCTTCATGTTTATCTTCCAAAATTTAAACTACAAGAGGATTATGATATGAATTCC
CTATTACAGCATTTGGGAATCTTGGATGTCTTCAATGGAAGCAAAGCTGACTTCTCAGGAATGTCTACTA
AGGAAAACCTGTGTCTGTCCAAGTTTGTTCACAAGTGTGTAGTAGAGGTCAATGAAGAAGGAACAGAGGC
TGTTGCAGCCTCTGCTGGCAAAATTATACTTTTCTGTGATGGTCCTGATCCCGAAGTTTTCTGTGCTGAC
CACCCCTTCCTTTTCTTCATCATGCACAGCACAACTAACAGCATCCTGTTCTGTGGCAGATTCACATCTC
CATAAGGCATATTTTTTATGGGGTAGAGTTCTCTCTTGGCAACTCTACCACTTCTACTGCTCTGTGAGAA
TGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTCATCTTTTCATTCTGATCTAGTGATGC
CCACATTCAGCTCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCAGGACAGATGACCACAGAGTGTTA
TGAATTCCCTTATAGATTAGAAGGCAAAGAGAATCCTCAAGATAACCTACAATGATCTCTAAAGTAACCC
TAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCTTTTCTTGGAACCACA
ACACTTGCCCTTACTTGCCTTATTCTGATTTTATCCTAACAAATGCTTCTCTGGGTGAGGACTGCTACTT
TTATTTTCCTGGTATCTGTTCCGTATGCACATATGAAATTCATTTTCCTTTCTGCCTACTACTCACCAGG
TATGTTCCCTATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCCTTTTCTATCT
GTTTTCAATATATTTACATATCATAACAACTAGTTTGGACTACCAAATGCCCTCCATGCAAAAGTCATGC
TTCTACAAACTACCATGATTCTCTAAAACTAAACATAATAGTCAAATTCTCTGGTCTTCAAATGCATTTC
AAAATAAATTTTTTATCAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30010652 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30010652 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004968 same experiment
 EMAGE:30648 same embryo
 EMAGE:32050 same embryo
 EMAGE:29253 same embryo
 EMAGE:32048 same embryo
 EMAGE:30664 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS