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EMAGE:30664

BC031441 (BC031441)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6947
Entity Detected:BC031441, (BC031441)
Sequence:sense strand is shown

>T6947
GGGAGGCTCTTGTGGTTCTGTGTCCTGGTCTGCCACCCGCTGCCGGGAGCTGTGAGGAGAGCGGGGCGAG
CTCGGTCTCCACGCCATGGATGCAGTGACCTATGAGGATGTGCATGTAAACTTCTCTCAAGAAGAATGGG
CTTTGCTGGATCCTTCTCAGAAGAGTCTCTACAAAGATGTGATGCTGGAAACCTACTGGAACCTTACTTG
TATAGGCTACAAATGGGAAGACCACAATATTGAGGATCAACATCAGAGTTCTGGAAGACATGGAAGGTGT
ATCAACTGTCCCTCTGCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGAAGAAGAT
ATGTAGTCACCCCCTTTGTGAAAAGAGGAGGTGAATGTGATACAAGTTTACAAGTACTTGGTTTTCCAGC
CTCAGTGGGAATACATCAAAATACTGACACTGGAGAAAAGCCCTCTGTGGACAAGGAAAGTGGAAAATCT
CCTGTCTGTCCTGGTTCACTTTGCACGTGTAGTGTGACTCACTCTATAGGAGAATGTTATGAATGCAGTC
AGTGTGGTAAAGCTCTGAGTTGTTCTCTTCAGAGACATGACCAAACTCATATGGGAAAAGGAAGTGATAA
ATGTGAGCCAAGTAGTAAAAGCTTAACCCATCCCAGGTATCTTCAAATACAGAAGACGGCCTATAATGAA
GAGGACCTCTATGTGTGGAATCAATGTGGTAAATCCTCTTTACAGCCACACCGAAGAACTCATTTGGGAA
TGAAATCCTGTGAATATAATCATGAAGATAAACTCATTTCACATCAGAATTGTAATCAAGTAGGTAGAAC
TAATACTAGAGACACAAAGCATGACTATCATCAATGGGGTAAAGCCTTTACATATCCCAGTTATCTTCAA
ATATATGAAAGAATTCATACTGAAGAGAAACCCTATGAATGCAGTCAATGTGGTAGAGCCTTTACATGTC
ATAGTACTCTCCAAATCCATGAAAGAATTCATACTGGAGAGAAACCCTATAAATGCAATCAGTGTGGTAA
AACCTTTGCATGTAAGAGGTATCTTCAAATCCATGAAAAAATTCATACTGGAGAGAAACCCTATAAATGT
AATCAGTGTGGTAAGGCCTTTGCATGCAATAGTTATCTTCAAATCCATGAAAGAATTCATACTGGTGAGA
AACCCTATAAATGTAGTCAGTGTGGTAAAGCCTTTGCATGCAATAGTTATCTTCAAATGCATGAAAGAAT
TCATACTGGTGAGAAACCCTATAAATGCAATCAGTGTGGGAAAGCCTTTGCATGTAACAGTAATCTTCAA
AAGCATGAAAGAACACATACTGGAGAGAAACCCTATAAATGTAATCAATGTGGCAAAGCCTTTACATGTC
ATAGTACTCTTCAAATCCATGAAAGAATACATACTGGAGAGAAACCCTATAAATGTAATCAATGTAGTAA
AGCCTTTGCACGTAAAAGATATCTTCAAATCCATGAAAGAATTCATACTGGAGAGAAACCCTATGAATGT
AATCAATGTGGTAAAGCCTTTGCATATAGCAGTAGTCTTAACAAGCATGAAAGAACTCATACTGCAGAGA
AACCCTTTGAATGTAATCAGTGTGGTATAGCCTTTGCATGTCTCAGTACTCTTCAAAAGCATGAAGGAAT
TCATACTGAAAAAATTCCCCAGCAATCTAAGAAATGAAGTGTAGCCTTGTATACTACATTCATTTTCCCT
TCTGAGTTTTCTCAGTGATGGTTGATGAAGATTAGTAGAACCATTCTTCATTAAAATATTGTCTCCTTTT
CAAATTTTAGACATATTGTCACTCCAATATAGGAATACCAGACAATTTGGATAATAAAATCTATTTGTGA
AAGAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3985007 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3985007 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004947 same experiment
 EMAGE:30648 same embryo
 EMAGE:30647 same embryo
 EMAGE:32050 same embryo
 EMAGE:29253 same embryo
 EMAGE:32048 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS