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EMAGE:30648

Serpinb9f ( MGI:894671)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30648
euxassay_004969_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8004
Entity Detected:Serpinb9f, ( MGI:894671)
Sequence:sense strand is shown

>T8004
CAGGGTCAGAGACCATTGAACACTGCACCGTGAGATCACAAACATTGGAGACACTGCATCATGAATACTC
TGTCTCAAGCCAATGGCACCTTTGCCATCCATCTTTTGAAGGTGCTCTGTCAAGACAACCCTTCAAAAAA
TGTGTGTTATTCTCCTATGAGCATCTCTTCTGCTCTAGCCATGGTTCTCTTGGGTGCAAAGGGAGACACT
GCAGTCCAGATATGTCAGGCACTTCATTTAAACCCAGATGAAGATGTCCATCAGGGCTTCCAGTTGCTTC
TCCATAACTTGAACAAGCAAAACAACCAAAAGTACTGCCTTAGAATGGCCAACAGGCTCTTTGTAGAAAA
TACTTGTGAATTACTTCCAACATTTAAGGAGTCCTGTCTTAAATTCTACCACTCTGAGATGGAGCAGCTC
TCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGTA
AAATTCCAGACTTATTGTCAAAAGACTCAGTTAATTCACAGACCAGGCTGATTCTCGCCAATGCCTTATA
TTTCCATGGAACATGGTGTAAACGTTTTGAAAAAAATAGGACCAAGGAAATGCCCTTTAAGATAAACAAG
AAGGAAACAAGACCAGTGCAGATGATGTGGCGGGAAGACACATTATTCCATGCCTATGTGAAGGAAATCC
AGGCACAAGTGCTAGTGATGCCCTATGAGGGCATAGATTTGAATTTTGTGGTCCTACTCCCAGATGAGGG
TGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAAACCAGAGTTT
ATGAATCGCACTGAGTTTCATGTTTATCTTCCAAAATTTCAACTACAAGAGGATTATGATATGAATTCCC
TGCTACAGCATTTGGGAATTTTGAATGTCTTCGATGGAAGCAAGGCTGACTTATCAGGAATGTCTACTAA
GGAAAACCTGTGTCTGTCCGAGTTTGTTCACAAGTGTGTAGTAGAGGTCAATGAGGAAGGAACAGAGGCT
GCTGCAGCCTCTGCTGTAGAATTTATATTTTTATGTTTAGGTCCTGATCCTGAAACTTTCTGTGCTGACC
ACCCCTTCCTTTTCTTCATCATGCACAGCACAACTAACAGCATCCTGTTCTGTGGCAGATTCTCATCTCC
ATAAGGCATATTTTTTATGGGGGTAGAGGTCTCTCTTGGCATCTCTACCAGCCTTACTGCTCTGTGAGGA
TGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTCACCGTTTCATTCTGATCTAGTGATGC
CCACATTCAGCTCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCAGGTCAGATGACCACAGAGTGTTA
TGGATTCCTTTATAGATTAGAAAGCAAAGGTAGTCCTCAAGATAACCTACAATGATCTCTAAAGTAACCC
TAAATAAACCTCCAGTCAATCCACAGACAAACAATGACATCAAAATACATTGTCTTTTCCTGGAACCACA
ACACTTGCCCTCACTTGCCTTATTCTGATTTTATCCTAACAAATGCTTCTCTGGGTGAGGACTGCCACTT
TTATTTCCTGGTATCTGTTCTGTATGCACATTTGAAATTCATTTTCCTTTCTGCCTACTACTCACCAGGT
ATGTTCCCAATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCCATTTCTATCTG
TTTTCAATATATTTACATATCATAACAACTAGTTTGGACTACCAAATGCCCTCCATGCAAAAGTCATGCT
TCTACAAACTACCATGATTCTCTAAAACTAAACATAATAGTCAAATTCTCTGGTCTTCAAATGCATTTCA
AAATAAATTTTTTATCAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30020424 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30020424 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004969 same experiment
 EMAGE:30647 same embryo
 EMAGE:32050 same embryo
 EMAGE:29253 same embryo
 EMAGE:32048 same embryo
 EMAGE:30664 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS