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EMAGE:32050

F11r F11 receptor ( MGI:1321398)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050
euxassay_004957_01 euxassay_004957_02 euxassay_004957_03 euxassay_004957_04 euxassay_004957_05
EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050
euxassay_004957_06 euxassay_004957_07 euxassay_004957_08 euxassay_004957_09 euxassay_004957_10
EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050
euxassay_004957_11 euxassay_004957_12 euxassay_004957_13 euxassay_004957_14 euxassay_004957_15
EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050 EMAGE:32050
euxassay_004957_16 euxassay_004957_17 euxassay_004957_18 euxassay_004957_19 euxassay_004957_20
EMAGE:32050 EMAGE:32050 EMAGE:32050
euxassay_004957_21 euxassay_004957_22 euxassay_004957_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
metanephros
strong strong
regionalstrong expression: see section 05 06 07 08 13 14 15 16 17 18
rectum
strong strong
regionalstrong expression: see section 10
bladder
strong strong
regionalstrong expression: see section 09 10 11
pancreas
strong strong
regionalstrong expression: see section 07 08 09
lower jaw molar
strong strong
regionalstrong expression: see section 06 07 17
pharyngo-tympanic tube
strong strong
regionalstrong expression: see section 01 02 03 04 19 20 21 22 23
upper jaw molar
strong strong
regionalstrong expression: see section 06 18
trachea
strong strong
regionalstrong expression: see section 12
nasal cavity respiratory epithelium
strong strong
regionalstrong expression: see section 10 11 12 14
vibrissa
strong strong
regionalstrong expression: see section 05 06 07 17 18 19 20 21 moderate expression: see section 03 04
nasal cavity olfactory epithelium
strong strong
regionalstrong expression: see section 08 09 10 15 16 17
naris
strong strong
regionalstrong expression: see section 15
esophagus epithelium
strong strong
regionalstrong expression: see section 11
nasal septum
strong strong
regionalstrong expression: see section 14
inner ear
moderate moderate
regionalmoderate expression: see section 05 06 07 08 15 16 17 18 19
tongue epithelium
strong strong
regionalstrong expression: see section 10 11 12 13 14
stomach
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07
urethra of male
strong strong
regionalstrong expression: see section 09 10 11
midgut
strong strong
regionalstrong expression: see section 05 06 07 08 09 10 11 12 13 14 15
conjunctival sac
moderate moderate
regionalmoderate expression: see section 01 02 03 04 21 22 23
adenohypophysis
strong strong
regionalstrong expression: see section 10 11 12 13 14
submandibular gland primordium
strong strong
regionalstrong expression: see section 15 16 17
naso-lacrimal duct
strong strong
regionalstrong expression: see section 03 04 05 06 08 17 18 19 21 22 moderate expression: see section 07
pharynx epithelium
strong strong
regionalstrong expression: see section 10 11 12 13 14
lower jaw incisor
strong strong
regionalstrong expression: see section 10 11 14 15
upper jaw incisor
strong strong
regionalstrong expression: see section 10 11 14 15
lung
strong strong
regionalstrong expression: see section 03 04 05 06 07 08 09 10 11 12 13 14 15 16 19 20
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6950
Entity Detected:F11r, F11 receptor ( MGI:1321398)
Sequence:sense strand is shown

>T6950
GTCGCGTCGGGATTGTAACTGTAATGGGCACCGAGGGGAAAGCCGGGAGGAAACTGTTGTTTCTCTTCAC
GTCTATGATCCTGGGCTCTTTGGTACAAGGCAAGGGTTCGGTGTACACTGCTCAATCTGACGTCCAGGTT
CCCGAGAACGAGTCCATCAAATTGACCTGCACCTACTCTGGCTTCTCCTCTCCCCGAGTGGAGTGGAAGT
TCGTCCAAGGCAGCACAACTGCACTTGTGTGTTATAACAGCCAGATCACAGCTCCCTATGCGGACCGAGT
CACCTTCTCATCCAGTGGCATCACGTTCAGTTCTGTGACCCGGAAGGACAATGGAGAGTATACTTGCATG
GTCTCCGAGGAAGGTGGCCAGAACTACGGGGAGGTCAGCATCCACCTCACTGTGCTTGTACCTCCATCCA
AGCCGACGATCAGTGTCCCCTCCTCTGTCACCATTGGGAACAGGGCAGTGCTGACCTGCTCAGAGCATGA
TGGTTCCCCACCCTCTGAATATTCCTGGTTCAAGGACGGGATATCCATGCTTACAGCAGATGCCAAGAAA
ACCCGGGCCTTCATGAATTCTTCATTCACCATTGATCCAAAGTCGGGGGATCTGATCTTTGACCCCGTGA
CAGCCTTTGATAGTGGTGAATACTACTGCCAGGCCCAGAATGGGTATGGGACAGCCATGAGGTCAGAGGC
TGCACACATGGATGCTGTGGAGCTGAATGTGGGGGGCATCGTGGCAGCTGTCCTGGTAACACTGATTCTC
CTTGGACTCTTGATTTTTGGCGTCTGGTTTGCCTATAGCCGTGGATACTTTGAAAGAACAAAGAAAGGGA
CTGCACCGGGTAAGAAGGTCATTTACAGCCAGCCCAGTACTCGAAGTGAGGGGGAATTCAAACAGACCTC
GTCGTTCCTGGTGTGACCTGCTGCGGCTCCTCCGTTGTCCATTTGCCTTACTCAGGTGCTACAGGTTCCA
GCCCCTGCTGGCTGTAGCTGCACAGGATGCCTTCAATGTCTTCTAGGTCCCACAGGACCCCTTGCTTTTA
TTCTAGCTAGGATATAAATTTAAAAACATCATCTACTTCCCCCTCCTCTTTCCCACCCTCCCTCCTTTCC
TTACCACCATTGGGTGGCCCGAGACTAATTACAAAGTTTTCGTTCCCCATTCCTATGTGGGATTGGGCAA
GAGTCCTAGACTAGACAGTAATAGTGGCTGGGCTGACAGGAACCCAAACCAATACTTGGCTGTAAAGGCC
TCTGAATAAGGACTTTAAGCCTAGCTCCCTGCTTTCTCCTCCCCGGATGGGGTGCCAGCTACTCTAGAGG
GGGAGCTGCAGAGAGGAGGGGCTGAGGATGGTGACCTCAGGTCTCTAGTCTTCGGAGCTTCTCTTCTGTC
TCCACAAAATGTGCCACTGGGATTCTCCTGGATTCAAAGTAAACTGACATGGTGTCCGTACGAGGTGGGA
GAGCTCTGTTAGCTCCCAAGAGACTTGGAGTAAGAAAGATTTAAAGTGATCTAAAGAAAAGGCTGGAACT
GGTGGCCATTAGTCACTCTTCATTTGGCTGGAACTACCGCACGGACCCTTTGAAGATATGTGTGGATGGA
GAAGATACGAGCTTTATAGTCTTGGCTCTTTGGTGGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGTAAATTGATATTGTTATATAGA
AGGGCTTTCTAGCTCTTTGGCAAGGTTGTGTTTCTGTGTGTTTATATTTGACAGATGTTGCTGGAAATAA
AAACTTCATTTGACAGAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3985305 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3985305 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004957 same experiment
 EMAGE:30648 same embryo
 EMAGE:30647 same embryo
 EMAGE:29253 same embryo
 EMAGE:32048 same embryo
 EMAGE:30664 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS