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EMAGE:7233

2410002O22Rik RIKEN cDNA 2410002O22 gene ( MGI:1914225)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233
"Pseudo-wholemount" of euxassay_004398. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004398_01 euxassay_004398_02 euxassay_004398_03 euxassay_004398_04
EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233
euxassay_004398_05 euxassay_004398_06 euxassay_004398_07 euxassay_004398_08 euxassay_004398_09
EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233
euxassay_004398_10 euxassay_004398_11 euxassay_004398_12 euxassay_004398_13 euxassay_004398_14
EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233
euxassay_004398_15 euxassay_004398_16 euxassay_004398_17 euxassay_004398_18 euxassay_004398_19
EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233 EMAGE:7233
euxassay_004398_20 euxassay_004398_21 euxassay_004398_22 euxassay_004398_23 euxassay_004398_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7233Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7233_wholemount_strong.wlz
7233_wholemount_moderate.wlz
7233_wholemount_weak.wlz
7233_wholemount_possible.wlz
7233_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7233_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6417
Entity Detected:2410002O22Rik, RIKEN cDNA 2410002O22 gene ( MGI:1914225)
Sequence:sense strand is shown

>T6417
GTGGATCGTTGTAGTCAGCCTTAGTGGTTGAGGCAAGTGTGTGCTTCTGAGCTAAGGAATGGCCATGGTA
CAAAGATTTCACTGGGGCCGTAAAGGATTTAGTGACAAGAGAATTTAAGTCCTCACGAGCAGAAAGAAGT
CGGGCGTGCGTTTGAAGCCCGATCTTCCGGGACCTGTGCTTTGCACTTTCCTTCCAGACCCGGTGAAACT
TCAGCCTGCGTAGGCTGAGGTCAGAAGTGCCCGCCAAGATGGAAGTGAATCCCCCCAAACAGGAGCACCT
GCTGGCGCTAAAAGTGATGCGATTGACTAAACCTACTTTGTTCACCAATATTCCTGTAACGTGTGAAGAG
AAGGACTTACCTGGTGATCTCTTTAACCAGTTAATGAAAGATGATCCTTCAACTGTAAATGGTGCAGAGA
TTTTAATGTTGGGAGAAATGTTGACTTTACCCCAAAATTTCGGGAATATATTTTTGGGAGAGACCTTTTC
CAGTTATATCAGTGTTCACAATGACAGCAATCAAGTTGTAAAAGATATATTGGTGAAGGCGGATCTGCAG
ACGAGTTCTCAGCGTTTAAACCTTTCAGCCTCCAATGCTGCTGTGGCTGAACTTAAACCCGACTGCTGTA
TTGATGACGTCATACACCATGAAGTAAAGGAAATTGGGACTCACATCTTGGTGTGTGCTGTGAGTTACAC
AACGCAGGGTGGAGAAAAAATGTACTTTAGGAAATTCTTCAAATTTCAGGTTCTCAAACCATTGGATGTG
AAAACCAAATTTTACAACGCAGAGAGTGACCTCAGTTCTGTGACTGATGAAGTATTTCTTGAAGCACAAA
TTCAGAATATTACAACCTCACCAATGTTTATGGAGAAAGTTTCACTAGAGCCATCAATAATGTACAATGT
AACAGAATTAAACTCGGTGACCCAGGCTGGAGAATGCATATCTACATTTGGGTCCAGAGGATATTTGCAG
CCAATGGATACACGCCAATACTTATACTGCCTAAAGCCCAAGAAGGAATTTGCAGAAAAAGCCGGCATAA
TTAAGGGAGTGACAGTAATTGGGAAACTGGATATAGTGTGGAAAACAAATCTAGGTGAAAGGGGACGGTT
ACAGACCAGCCAGCTTCAAAGGATGGCTCCAGGTTATGGGGATGTTAGGCTGTCTTTAGAGGCCATCCCA
GACACTGTAAACCTAGAAGAACCTTTCCATATTACCTGTAAAATCACAAACTGCAGCAGTGAGAGGATGA
TGGACCTCGTGCTGGAGATGTGCAACACCAATTCCATCCACTGGTGTGGGATCTCAGGACGACAGCTGGG
GAAACTGCACCCCAGCTCCTCGCTCTGCCTGGCCCTGACGCTCCTGTCCTCAGTACAGGGGCTCCAAAGT
GTCTCTGGCTTAAGACTCACTGACACATTTCTAAAGAGAACATACGAATATGATGACATCGCGCAAGTCT
GCGTAGTCTCAGCAGCCGTGGAAGTGGAAGCCTAAAGAAAATTCCTAATGTTAGACTTCTTGTTTAATCA
CAGAAATGCTCTCTGTATTTCGTCAGCTTTGTGCAGTGATCAGTAGTGAAAACAAGTATATGTTATTTAA
ATGTTTCTTGTAAAACAGTTCAATTTTAAACGTTTGTTGTAAAAACACTACTTTTATCTTTCAAATTATA
TTCTAGAGGAACAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3584010 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3584010 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7234 same embryo
 EMAGE:7232 same embryo
 EMAGE:7231 same embryo
 EMAGE:7236 same embryo
 EMAGE:7235 same embryo
 EurExpress:euxassay_004398 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS