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EMAGE:7285

Pik3r6 phosphoinositide-3-kinase, regulatory subunit 6 ( MGI:2144613)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7285
euxassay_004354_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7285Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7285_wholemount_possible.wlz
7285_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7285_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5223
Entity Detected:Pik3r6, phosphoinositide-3-kinase, regulatory subunit 6 ( MGI:2144613)
Sequence:sense strand is shown

>T5223
TTTTTCTGCAGATCTCTAGAGTGGACAGTCAGGACGACAAGCTCTCTTTGGCTCCTTTGGGACATCTGGT
CCTTGGGGTTGCTGGCCTCCTGAACAGGACCTCAGGAGCTCATTGGCTGGAGGGTCTGGGGACGTGGACA
ACTGTGGTCCAGCTAAGAAATCTCTGTGTAGAAACCACCATTCTACGTTCTGCTCTGCTGCTTGAGACGA
CCACATCCTCCCCCATACAGGACAGACTCCATGGAGAGCTCAGATGTGGAGCTGGACTTCCAGAGGAGTG
TACAGGCTGTGCTGCGAGAGCTCAACACCCCAAACCCAGCCCTCCAGAGCAATCAGGGCATGTGGAGATG
GTCTCTGCACAAGAAGGTGGAGAGAAACCCAGGAAAGAGCTCCATTCTGGTCCGAATTCTGCTCAGAGAG
CTGGAGAAGGCAGAAAGCGAGGACGGACGCCGTGTCATCATTCCCTTGCTGCTCACTCTAATGTCCGTGC
TCACTAAGGCCACAGGCATCCCAGAAGATCTGTACCATAGAGCTTATACCTTCTGCACCAGGCTACTGAC
CCTGCCGGCCCCCTACTCTACAGTCGCCTTGGACTGCGCCATAAGACTGAAAACAGAGACGGCTGTCCCA
GGTACGCTGTACCAGAGGACTGTCATCGCTGAGCAGAATCTGATAAGTGAACTATACCCTTACCAGGAGA
GGGTGTTTCTGTTCGTGGACCCTGAGCTGGTTTCTGCCTCCGTGTGCAGTGCCCTGCTGCTGGAGATCCA
GGCGGCCCAAGAGCAGCAGACACCGGAGGCCTGCATGCGCCACGTGGTCTCCCACGCCTTGCAGGCAGCT
CTGGGAGAAGCCTGCCACACAGGTGCTCTGAACAGGAAGCTGCAGGCCAGCTCCCGACGCGTCCTGGAAT
ACTATTTCCACGCCGTTGTGGCTGCCATAGAGCAGGTGGCTAGCGAGGACAGCCCCAGCCGGCTGGGACA
CCTGGAGAAGATGGAGGAGATTTACTGCTCGCTGCTAGGGCCTGCGACCACAAGAAGGCACTGTGTCGGT
GACCTTCTGCAAGACCGCCTGCCAAGCATCCCCCTGCCCAGCCCCTACATCACCTTCCACCTCTGGACCG
ACCAGGAGCAGCTCTGGAAGGAACTGGTACTCTTCCTCCGCCCACGCTCGCAGCTGCGCCTCAGTGCTGA
TCTGGATGCCTTGGATCTACAAGGATTTAGGCTAGACCGGGACTTGGCCCGGGTGTCCACCGACAGTGGA
ATTGAGCGGGACCTCCCTTTGGGGAGCGATGAGCTTCCGGACCCCAGCAGCTCTGAGATGGAGCGGGCCG
CCCTTCAACGCAAGGGGGGCATCAAGAAGCGTGTGTGGCCCCCTGACTTCTTCATGCCTGGCAGCTGGGA
TGGGCCCCCGGGGTTGCATCGGAGGACTGGCAGGCCTAGTGGGGACGGGGAGCTGCTACCTGGAGTCTCT
CGGGTGCATACCGCCCGCGTGCTCGTTCTGGGGGATGACAGGATGCTAGGGCGCTTGGCCCAGGCTTACT
ACAGACTCAGGAAACGGGAGACCAAGAAGTTCTGCCTCACTCCTAGACTCAGCCTACAGCTCTACTATAT
CCCTGTGCTGGCGCCTCAGGATCCAGAAGCATCCAGGAAGCCTGAGCTGGGAGAGCTGGCTTCCTTCCTG
GGTCGAGTCGACCCATGGTATGAAAGCACTGTCAACACCCTGTGTCCTGCCATCCTCAAGCTGGCCGAGA
TGCCTCCCTACTTGGACACATCTAGGACCGTGGACCCCTTCATCCTGGATGTCATCACTTACTATGTCCG
CATGGGCACTCAGCCCATCTATTTCCAGCTCTACAAGGTTAAGATCTTCACCAGCTTGAGTCACGACCCT
ACAGAGGACATTTTCCTCACAGAGCTGAAGGTGAAGATCCAAGACTCCAAGTCCCCCAAAGAGGGCTCTT
CACCTCGAAGGAGAGGGGCAGCTGAGGGCACAGGAGCTGAGCTGTCCATGTGCTACCAGAAGGCCCTGCT
CAGCCACAGACCACGAGAGGTCACTGTTTCTCTGCGGGCCACCGGGCTGGTCCTGAAGGCCATTCCAGCT
GGTGACACTGAAGTTTCAGGGTTCTTCCACTGTACCTCACCAAATGCTGCTTCTGCCACAGACTGTTCCT
GTCTGCACGTCAGTGTGACAGAGGTGGTCAAGTCCTCCAATCTGGCAGGAAGGTCATTTACGACATCAAC
CAACACCTTCCGGACATCCAGTATCCAAGTCCAGAGCCAAGACCAGAGGCTGCTCACACTATGGCTGGAC
AAGGACGGACGGCGGACTTTCAGGGATGTGGTCAGATTTGAGGTCAGTCCCTGCCCAGAGCCATGTTCAC
GGACCCAGAAATCCAAGACGTCAGCGCTCAATTCGCACGGGCAGGAGACAGAGAAGAACATGGCCAAGCC
CAATTCTCTTCTGATGCCCATCAACACATTCTCTGGCATCATCCAATAAGCTTACCAGGACAGTGGGAGA
TCTGGGTCCAGGGGCAGCAGACCCAAGAAGGAAGAAACACTACCCACCCATCCACAACATTTACACTGAC
AGCCCCACTGGGCAGCTCTGCTTGGACCAGGAGCCAGAGAATGCCTGGGAATTAAAAGAGCCTGGGTTGT
AATGAATAAGGGGCATGTGATAAAGATGGATGCAGCCCACGGCTCCCAGATTGCTGGACAGAGTTGGAAT
GAGATGAGCTGATGCATACTCAAGCCAGCTTCTCCCAGAAACATCTTTCTTGTGATGATGTTCATTTCCC
GTTTCTCATCCACCATCCACTCCAGCTCCCTAGGGAGTCCTGAGAACTGGTGTCAGTTAGCTGCAGGTAT
AGCTGGTGGTTCAGCGGTAGAGCACTTGCCTAGTGTGTGGGAGGCCTTGGGTTTGACCTCAGTTTATAAA
AAGGGGTTCAGAGCTGATGGGTTCACTATTTGTACAGCGCCCTGTGGCTTTGGAAGGACCAGGGAGTAGG
TAGTGAATACTGTATTTGCTCCCTTCTGACTTCATACCATCCTTTGCAGCTCTCAAGGCCACGGTTCGCC
AGTGCCGAGGGGGGTCGGTCTGTCTCAGTAAAGAAGAGAGTGATAGTCTCAATAAAAGCACACTAAAGTG
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5356085 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5356085 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7288 same embryo
 EMAGE:7289 same embryo
 EMAGE:7290 same embryo
 EMAGE:7287 same embryo
 EMAGE:7286 same embryo
 EurExpress:euxassay_004354 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS