Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7298

Taldo1 transaldolase 1 ( MGI:1274789)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298
"Pseudo-wholemount" of euxassay_004418. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004418_01 euxassay_004418_02 euxassay_004418_03 euxassay_004418_04
EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298
euxassay_004418_05 euxassay_004418_06 euxassay_004418_07 euxassay_004418_08 euxassay_004418_09
EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298
euxassay_004418_10 euxassay_004418_11 euxassay_004418_12 euxassay_004418_13 euxassay_004418_14
EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298
euxassay_004418_15 euxassay_004418_16 euxassay_004418_17 euxassay_004418_18 euxassay_004418_19
EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298 EMAGE:7298
euxassay_004418_20 euxassay_004418_21 euxassay_004418_22 euxassay_004418_23 euxassay_004418_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7298Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7298_wholemount_strong.wlz
7298_wholemount_moderate.wlz
7298_wholemount_weak.wlz
7298_wholemount_possible.wlz
7298_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7298_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6423
Entity Detected:Taldo1, transaldolase 1 ( MGI:1274789)
Sequence:sense strand is shown

>T6423
CGGACGCGTGGGTCGCCATGTCGGGGTCCCCGGTAAAGCGCCAGAGGATGGAGTCCGCCTTGGACCAGCT
CAAGCAGTTCACCACCGTGGTGGCCGACACGGGTGATTTCAATGCCATCGATGAATACAAGCCCCAAGAT
GCCACCACCAACCCATCCCTGATCCTGGCTGCAGCCCAGATGCCTGCCTACCAAGAGCTGGTAGAGGAGG
CCATTGCCTACGGCAAGAAGCTGGGTGGGCCTCAAGAGGAGCAGATTAAAAATGCCATTGACAAACTTTT
TGTGCTGTTTGGAGCAGAAATATTAAAGAAGATTCCAGGCCGTGTATCCACAGAAGTTGATGCAAGGCTT
TCCTTTGATAAGGATGCCATGGTGGCCCGAGCCAGGCGCCTCATCGAGCTTTACAAAGAAGCTGGGGTCG
GCAAGGACAGAATTCTCATCAAGTTATCATCAACCTGGGAGGGGATTCAGGCTGGAAAGGAGCTGGAGGA
ACAGCATGGCATCCACTGCAACATGACACTGCTTTTCTCCTTCGCCCAGGCTGTGGCCTGTGCTGAGGCG
GGCGTGACGCTCATCTCTCCCTTTGTGGGGCGCATCCTTGATTGGCATGTGGCAAACACAGACAAGAAAT
CCTATGAACCCCAGGAGGACCCTGGGGTCAAGAGTGTCACCAAAATCTACAACTACTACAAGAAGTTCGG
CTACAAGACCATTGTCATGGGCGCCTCCTTCCGCAACACGGGCGAGATCAAAGCACTGGCGGGCTGTGAC
TTCCTCACCATCTCCCCGAAGCTCCTGGGGGAGCTGCTCAAGGATAACAGCAAGCTGGCGCCTGCGCTCT
CTGTCAAGGCGGCCCAGACCAGTGACTCGGAGAAGATACATCTGGACGAGAAGGCCTTCCGTTGGCTGCA
CAACGAAGACCAAATGGCCGTGGAGAAGCTCTCCGACGGCATCCGCAAATTTGCTGCTGATGCCATAAAG
TTGGAGCGGATGCTCACGGAACGAATGTTCAGCGCTGAGAACGGGAAGTAGTGCAACACCCGAGGCCCCA
GTCCTGCACCGAGGCTGACCCCAGACCTGCACTGCCTTTGAGCTGGGTCCTAATTGCACATGGCTTGTGA
CGAATGAATCTTGCATTTTTTAGTGATCGGAGAAGGGATGGATCATAGGATTCTGATTTTATGTGAAATT
TTGTCTAATTCATTAAAGCAGTTGCTTTTCCTAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3584511 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3584511 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7302 same embryo
 EMAGE:7299 same embryo
 EMAGE:7301 same embryo
 EMAGE:7300 same embryo
 EMAGE:7303 same embryo
 EurExpress:euxassay_004418 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS