EMAGE mouse gene expression spatial database

Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7361

Tab2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 ( MGI:1915902)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_004462. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_004462_01	euxassay_004462_02	euxassay_004462_03	euxassay_004462_04

euxassay_004462_05	euxassay_004462_06	euxassay_004462_07	euxassay_004462_08	euxassay_004462_09

euxassay_004462_10	euxassay_004462_11	euxassay_004462_12	euxassay_004462_13	euxassay_004462_14

euxassay_004462_15	euxassay_004462_16	euxassay_004462_17	euxassay_004462_18	euxassay_004462_19

euxassay_004462_20	euxassay_004462_21	euxassay_004462_22	euxassay_004462_23	euxassay_004462_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

7361_wholemount_strong.wlz

7361_wholemount_moderate.wlz

7361_wholemount_weak.wlz

7361_wholemount_possible.wlz

7361_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:7361_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T6458
Entity Detected:	Tab2, TGF-beta activated kinase 1/MAP3K7 binding protein 2 ( MGI:1915902)
Sequence:	sense strand is shown >T6458 GCCAGAAGAGATGAGTACTAATTCCACTCAGGCCTAGAATTGCCTATTGAGATAGACCTGAGCAGGCGAC ATACGAATGGCCCAAGGAAGCCACCAAATTGATTTTCAGGTTTTACATGACCTGCGACAAAAATTCCCAG AAGTGCCTGAAGTTGTTGTATCCAGGTGCATGTTACAGAACAATAATAACCTGGATGCCTGCTGCGCTGT TCTCTCTCAGGAGAGTACAAGGTATCTTTATGGTGAAGGAGACCTGAATTTTTCAGATGAGTCTGGAATT TCTGGTCTACGCAATCACATGACTTCTCTCAACTTGGACTTGCAGTCACAGAATGTTTACCACCATGGAA GAGAAGGAAGTCGAGTGAATGGAAGCAGGACTTTAACACACAGCGTTAGTGATGGACAGCTTCACGGTGG GCAGTCCAATAACGAACTGTTTCAGCAAGAGCCACAGACAGCACCAGCTCAAGTTCCTCAAGGCTTTAAT GTTTTTGGAATGCCCAGTACATCTGGTGCTTCAAACTCAACACCGCATCTTGGATTTCACCTAGGCAGCA AAGGGACATCAAACCTTTCTCAACAGACTCCCAGGTTCAATCCTATTATGGTAACTTTAGCCCCAAACAT ACAGACTGGCCGTAGTACTCCTACATCTTTGCACATACATGGTGTACCTCCGCCTGTACTGAACAGTCCA CAGGGAAATTCTATCTATATTAGGCCTTATATTACAACTCCTAGTGGTACAGCTCGGCAGACACAACAAC ATTCTGGCTGGGTGTCTCAGTTTAATCCCATGAACCCTCAGCAAGCCTATCAACCTTCACAGCCTGGACC TTGGACTACTTATCCTGCATCCAATCCTTTGCCACATACCTCAACCCAGCAGCCGAATCAGCAGGGCCAT CAGACCTCTCATGTCTACATGCCTATCAGTTCGCCAACTACTCCACAACCGCCAACCATTCACTCATCTG GGAGCTCTCAGTCTTCTGCCCATAGCCAATATAACATTCAGAATATTTCAACAGGACCTCGAAAGAACCA GATAGAAATCAAACTTGAACCCCCACAAAGAAACAGTTCTTCAAAATTACGTTCTTCTGGACCTCGAACT GCCAGCACTTCCTCATTGGTCAACAGCCAGACCTTAAATAGAAATCAGCCCACTGTTTACATAGCTGCCA GTCCTCCAAATACTGATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGC AGGAGATGAGCAAGGCATGCGGAATCAACCGACACTCTTCATATCTACAAACTCTGGGCCATCTGCAGCC TCCAGGAACATGTCTGGGCAAGTGAGCATGGGTCCTGCCTTTATCCATCACCATCCACCCAAAAGCCGAG TGTTAGGTGGTAACTCTGCAACGTCTCCTCGAGTGGTGGTCACTCAACCCAACACAAAATATACTTTCAA AATTACAGTTTCCCCCAATAAGCCCCCTGCTGTTTCCCCGGGGGTGGTCTCCCCAACCTTTGAACTTACA AATCTTCTAAATCATCCTGACCATTATGTAGAAACAGAGAACATTCAGCATCTCACAGACCCGGCTCTAG CACATGTGGATAGAATAAGCGAAGCCCGGAAACTGAGTATGGGATCTGATGATGCTGCCTACACACAAGC TCTGCTGGTGCACCAGAAGGCCAGGATGGAACGGCTTCAAAGAGAGCTCGAGATGCAAAAGAAAAAGCTG GATAAACTCAAATCTGAGGTCAATGAGATGGAAAATAATCTAACTCGAAGGCGCCTGAAGAGATCAAATT CCATTTCCCAGATACCGTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAATAGACAACTCCAGATTGA CATTGACTGCTTAACCAAAGAAATTGATCTTTTTCAAGCCCGAGGACCACATTTTAACCCCAGCGCTATT CATAACTTTTATGACAATATTGGATTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCA TCAAAGCACCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCCTGTACGTT TCTGAATCATCCGGCCTTAATCCGCTGTGAACAGTGTGAGATGCCTCGGCATTTCTGAGCCAAAGGCCCC GCCTTCCTCTGAAACCACATCTAAAGTTCAAGAAGGTCGCCTGTCATCGGGAAAGTGTTTCACCGCCACA GGAGTTAGTCCAGTTGAAGGTGTGACGAGACAGTGGTGTGCTGTGTTGAGTGTCAGCCCACAGAGCTAAT GATACCTCAATCTAATGTCATGGGCAGTGAGATTCATCACCTGAAAGGCCTGAGAGACCGGGCTGCCTGC TGCCTGACCATGTCCAGTGTCACGTGTCAGTGCCTAGGTGTTCCCAGGACTCCTCCCCTCTTGTCACCAC TGATCCTGATGGGAGGAAGGGAGAGACAGGATGATTGCTTTTTGTGTTGTTAGAGCTTTTGGTGAAACAC TACATACACAAAGAGAAGGAACAAGGTTTGACTGAGAACTCTGCTGCCACATAGTGCCAGTAGATGTGGG AAACGCCACAAATCTGGGGTACTTTTGGCCCTGTCCTCTGTCTTCTGAGGACGTCTCTGTGAAGCCAGCA TTTAGGTGTGAGATAAAAGGAAAGCTGTGTCTGTCTGTACATCCACAGTGCGCTCCCCAAGCCTCTCCTA CTGTACAGATGTCTCACGTCTGCTTTGATTTCTCCATTATCTTCTTATATTTCTATATGTATAGTGTAAT AGACTTGTGTTAACTAGTGTCCTTTTCCCTTTTAGTAAGCACGATCATGCTCCTTTTAAGCCTTACCTGA GAAAAGCAATGCCATAAGGTAGAAAGCATTAATGAAATGAAACTGTGCACAACATAACTCCCTCTCCCCT TCCTCCTCCTGTCCTTTGTCCCTTGGTGCCAATGCTCTGAGAAGACATGCAGGTGCTGCATGTGAGTCAC TGCAAGAAACACTGCAGCCATCGGACGGTCGAGGTCACGCTGTACACTGACTTGAGCAGTGGGTGACCAA ACATGTCGTTTTGTCTTCTCCAGCAGCTTAAAGCAGAAAGTATTTAAACCCACTGCCATCTTGCCCCATC TGTGTGGTATCCCATAGAACTCCATGGGAGGCTCTTGTTGGGAAAATGCAGTTTTAAGAAGCAGCCTCAG CAGCCGTTCCCGCAGCCTCTTCTTCCCGGGAAGAAGTGTGGCTGTCGGACTGTTGGCACAGTCATGTGTA TTTATAAAACATAGTCATCTTTAGGACAACTGAAGAAAAGCTGGAAAAAAGAAAGAAAACAAGCAGACTT GAACACTGAAGCAACCTCAGACATCTCTTTATTTTGATGATATATTTTTGTAAGGAAAATAAATATTCAT ATGATCAGGAATGTATATAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:3586132 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3586132 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:7362 same embryo
	EMAGE:7364 same embryo
	EMAGE:7360 same embryo
	EMAGE:7359 same embryo
	EMAGE:7363 same embryo
	EurExpress:euxassay_004462 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source