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EMAGE:7570

Ccdc127 coiled-coil domain containing 127 ( MGI:1914683)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570
"Pseudo-wholemount" of euxassay_004665. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004665_01 euxassay_004665_02 euxassay_004665_03 euxassay_004665_04
EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570
euxassay_004665_05 euxassay_004665_06 euxassay_004665_07 euxassay_004665_08 euxassay_004665_09
EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570
euxassay_004665_10 euxassay_004665_11 euxassay_004665_12 euxassay_004665_13 euxassay_004665_14
EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570
euxassay_004665_15 euxassay_004665_16 euxassay_004665_17 euxassay_004665_18 euxassay_004665_19
EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570 EMAGE:7570
euxassay_004665_20 euxassay_004665_21 euxassay_004665_22 euxassay_004665_23 euxassay_004665_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7570Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7570_wholemount_strong.wlz
7570_wholemount_moderate.wlz
7570_wholemount_weak.wlz
7570_wholemount_possible.wlz
7570_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7570_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8655
Entity Detected:Ccdc127, coiled-coil domain containing 127 ( MGI:1914683)
Sequence:sense strand is shown

>T8655
TACCATTCTGATGTAGGGTGGCAGCAACGCTGATGGGCTCTGCTCCAGGGCTCCATGAATAACTTAAACG
ACCCCCCAAATTGGAATATCAGGCCCAATGCCAGGGCTGATGGGGGTGATGGAAGCAAGTGGAATTATGC
CCTATTGGTGCCAATGCTCGGATTGGCAGCATTTCGTTGGATTTGGTCTAGGGAATCCCAAAAAGAGATA
GAAAAAGCCAGAAAAGCATATCATCAGAGAACAGCTGCTTTCCAACAGGATCTTGAAGCCAAATACCATG
CTGTGATCTCAGAACACCGGCGCGCTGTGGCTCAGCTGTCTTTGGAACTGGAAAAAGAGCAAAATAGAAC
AAGTAGTTTTCGAGAAGCCCTCATCTCGCAGGGGCGTAAGTTGGCAGAAGAAAAGAAACTTCTCGAACAG
GAACGGGCTCAGATAAAGCAAGAAAAAAGCCGGCTCCAGCCTCTGAGAAATGTCTATTTGAGCTGCCTGC
AAGAAGAGGATGACTGGCAGAGGAGAGCCCAGCATGTGCTGAAAGAGGTGGGAGAAGCTCTCGAGGAACG
CCAAAATATCTATTGTAGCCTGATCATCCCCCGTAGTGCACGACTAGAGCTGGAGAAGAGCTTACTGGTG
CGCACATCTGTTGATCCAGTGGCTGCTGACCTAGAAATGGCAGCTGGCTTGTCTGACATATTTAAGCATG
ATAAGCATTGTGGAGATGTCTGGAACACCAACAAACGTCAAAATGGGAAGCTCATGTGGATGTATCTCAA
ATACTGGGAACTACTTGTCGAACTTAAAAAATTTAAGAAAGTAGAGAAGGTCATATTAGAAAAATAAGAA
TGTAATGAAACTCAAGGCCAGAGGGAGTCTCTCCCCATGGCAGTCTGCAGTCTGGGGTCTCTTGATATTT
TTACTCTGTTCCTTTGCCACCAAAAGTGGCCCAGTAGAGCTACTCGTTGTGAGAACTCAAGTCTTTCCAC
CCTTTGAGCAGTGCAGTGGGGCCTTAGCAGATAATGTTTTTCTACGATGCTATGCAGCTATTAGAGATAC
TTTTTTTGAAACATTTTTGAGCTGCTAATATTTAGCAAAACAAGTACAACTATATATTTTAGTTCTAAGG
GGAAAAAAATACAATATTCTTACTCTAAGAAATGTTTTCTCAGTTTTTACCTCTACTCCCTTTCCTGATT
TCATGTAAGAGTTGTTGAGTAATATAGTAGTTATATTACCAAAATTTATCTTGTTTGGAACACCCCACCA
CCACCAAAAAAACCAAATATTTCTTATGCCCAGCCGGTACCCCAGTGAATATTTAGAATTGAGCTGGTCC
TGTATTCAATAAGCATGTTATTTATTAGCAATGATATGCAGTCAATAATATTTGTCATTTAAAAGTAATG
GTGTTGCTTTTTTTTTTTTTTAAATGGTTTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGG
AACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGTTGGGA
TTAAAGGCATACAACCACCACGCCGGGCATGGTATTACTTTTTGTGTGACTTTTACTATTTTTTTTTTGA
GACAATCTTACTACATAGCCCAGGTGGACAGTCTTCCTGCCTCAGGCTCCCACATGCTGTGATTACAAGT
GTGTATTACATTCTTGGGTTGATAATTTTGCATGTATTGATAAGTACTTATAACTCATTTACATACAGCT
TATATGAGTTGACCCTTTGTACATAACTTACATAATCCTTACTCTGGTTTTATGAGCTAAGTACTTGTAA
ATGGTAATTTCTCAAGATACCCAGGTTCTGTGACTTGCCATAGTTTCTAATACTCAACCTATGGTTGCCC
TCAGGACTAAGATTTGTGTTAGCAAGAAAGATAAAATCAGCAGAGAACAGGCATGTAGAAGAATCTAGAG
GGAGCCAGATGGAGCCACCAGGGGTTACACTGTGGAATCCCAGGGAGCATTGTTTAGTTTAGGGGTATAA
CTAGAAACACAACAAATTCCCAGGAAAGCTCACTGGAGACTATCAAGATTTTGATAGAGTGAGATCTATT
CATGTGACCTTTCACAGCAGTTCCATTCCCACAGGAAGGCAAGTGGTAGAAGTCACTCATAGTCTGTAAG
CAGTTTAGGTATGGTGAATCACTCTTGCTAGTTACCAGCACTGGGAACTCCCAGCATCTAGACACCTATT
AGGGACTAGCCTTGTGTGAGGATGCACTATGAAGTCTGTTAAGTGAGCTTTCCCACATAGCCTTATTTTA
CAGAGGATGGGGATAGAGAGCCTTAATATGGAGAAAGCAATCTGTCTAGGTCATAGGTAGTATTTTGTGG
AGTGGATCTGAGTTGGGTGTTTGATTTACAGACATTGGAACCTGTGTGTGGTTATTTGTCAGTAGCCATG
CAGGAAGTGAACAAAGTAGTCAGTTTGTGTTCAGATCCTATATTCTACCCTGTGCATATCTTTCTGTGTA
GAGAGATGGCAAACTTGAAAATACTTACCCAGAAAACAGTTCAGTTATAGAATGGTTAAGGAGCACTTGG
CCCGCTTCCTATTCCACATTTAGTTTTCAGAACTACCTTGACAGAGCTGATAGCAGGCACTCTGAGCAGA
AGCCAGGTAATTCCACCTTCAGATAAAGCTCTTGTCCGTAGCTATTTACCATGTCTTTCTGCTGTATTAC
CAGTCTTTTGAGAAGTTATTTTTTTCTAGTACATCTAAGAAACAGTTTTTTAAGATTGTGTTTCCTAATT
CATTAGACCATTGAAGGAAGCCACATAGGCTCTAGTTTTCTGTTACTCCACTGGTTTGCCCATGTGATCT
TGGACAGACCACCTCATGGCTTTCTCTAAGATTTATCTTTTAAAATGACACATTTTCCAGGGGAATCACA
TCACTGTTTGAGTCTGTGGCATGCCCGCCTTCCATCCTAAGTATGCTTTCTGTCTTTTTCAACTGAAAAT
GTTAGTAGCATATTTTATTGCTGTTCGGGGTCAAGTGGAAGTAGACAGACCTTGGGGGTAGAGACAGCAC
AGGAGGATCTGGAATGGTTTACCTGTGAGAGGAGGTCCTGAAATGGGGAGGTACCTGAGAAGGGTCACAT
GGAGAAGGACTACAAGTGGGAGTCAAGTCCCTTGGTTGGCACACGGATGGTTATAGAGCTAAGTTTTTTA
CTTCAGTCACAAAAGAATTATTTTCACACTCTTAAGTTTTAAAGTTTAGATTATTACGTAAATAAACTGT
ACATGAGTTTAGCCACACTCCTATTTTATTAGCATTTCATTACAGTAGTACTTTGGCAAAGCAAATACTG
GAAATAAAGTCTAAACGAGTCAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5721356 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5721356 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7571 same embryo
 EMAGE:7567 same embryo
 EMAGE:7569 same embryo
 EMAGE:7568 same embryo
 EMAGE:7566 same embryo
 EurExpress:euxassay_004665 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS