Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:32048

Dkk1 dickkopf homolog 1 (Xenopus laevis) ( MGI:1329040)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048
euxassay_004956_01 euxassay_004956_02 euxassay_004956_03 euxassay_004956_04 euxassay_004956_05
EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048
euxassay_004956_06 euxassay_004956_07 euxassay_004956_08 euxassay_004956_09 euxassay_004956_10
EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048
euxassay_004956_11 euxassay_004956_12 euxassay_004956_13 euxassay_004956_14 euxassay_004956_15
EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048 EMAGE:32048
euxassay_004956_16 euxassay_004956_17 euxassay_004956_18 euxassay_004956_19 euxassay_004956_20
EMAGE:32048 EMAGE:32048
euxassay_004956_21 euxassay_004956_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 04 05 06 07
metanephros
strong strong
spottedstrong expression: see section 05 06 07 08 13 14 15 16 17
cervico-thoracic ganglion
moderate moderate
regionalmoderate expression: see section 08 weak expression: see section 14
spinal cord
moderate moderate
regionalmoderate expression: see section 09 10 11 12 13
thoracic ganglion
moderate moderate
regionalmoderate expression: see section 14
interdigital region between hindlimb digits 1 and 2
strong strong
regionalstrong expression: see section 14 15 16
lower jaw molar
strong strong
regionalstrong expression: see section 16 17
upper jaw molar
strong strong
regionalstrong expression: see section 16 17
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08
tibia
strong strong
regionalstrong expression: see section 19 20
vibrissa
strong strong
regionalstrong expression: see section 05 06 07 08 09 16 17 18 21 moderate expression: see section 03 04 19 20
cervical ganglion
moderate moderate
regionalmoderate expression: see section 07 08 16 weak expression: see section 15
hand
strong strong
regionalstrong expression: see section 18 19 20 21 22
eyelid
strong strong
regionalstrong expression: see section 02 03 04 21 22 moderate expression: see section 01 20
orbito-sphenoid
strong strong
regionalstrong expression: see section 01 02 03 04 05 19 20 21 22 moderate expression: see section 06
mandible
strong strong
regionalstrong expression: see section 01 02 03 04 05 06 07 08 09 10 13 14 15 16 17 18 19 20 21 22
interdigital region between hindlimb digits 4 and 5
strong strong
regionalstrong expression: see section 14 15 16
palatal shelf
strong strong
regionalstrong expression: see section 14 15
interdigital region between hindlimb digits 3 and 4
strong strong
regionalstrong expression: see section 14 15 16
fibula
strong strong
regionalstrong expression: see section 20
rib
strong strong
regionalstrong expression: see section 02 03 04 05 moderate expression: see section 06 15 16 17 18 19 20
brain
moderate moderate
regionalmoderate expression: see section 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 06
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 07 08 14 15
foot
strong strong
regionalstrong expression: see section 13 17
interdigital region between hindlimb digits 2 and 3
strong strong
regionalstrong expression: see section 14 15 16
maxilla
strong strong
regionalstrong expression: see section 06 07 08 09 10 11 13 14 15 16 17 18 19 20 21 not examined expression: see section 22
lower jaw incisor
strong strong
regionalstrong expression: see section 10 11 13 14
upper jaw incisor
strong strong
regionalstrong expression: see section 10 11 14 15
glans of male genital tubercle
strong strong
regionalstrong expression: see section 08 09 10 11 12
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7977
Entity Detected:Dkk1, dickkopf homolog 1 (Xenopus laevis) ( MGI:1329040)
Sequence:sense strand is shown

>T7977
AGAGACTCCACCAGCGGAGGTCCCGAAGTTGAGGTTCCGCAGTCCAGACTCTGCAGCCAGCCGCCGTGCA
AAGTGACCTCTCTTTTCCTGACCTTTGCCTGTTTGCGTCCTTCGGAGATGATGGTTGTGTGTGCAGCGGC
AGCTGTCCGGTTCTTGGCCGTGTTTACAATGATGGCTCTCTGCAGCCTCCCTCTGCTAGGAGCCAGTGCC
ACCTTGAACTCAGTTCTCATCAATTCCAACGCGATCAAGAACCTGCCCCCACCGCTGGGTGGTGCTGGGG
GGCAGCCGGGCTCTGCTGTCAGTGTGGCGCCGGGAGTTCTCTATGAGGGCGGGAACAAGTACCAGACTCT
TGACAACTACCAGCCCTACCCTTGCGCTGAAGATGAGGAGTGCGGCTCTGACGAGTACTGCTCCAGCCCC
AGCCGCGGGGCAGCCGGCGTCGGAGGTGTACAGATCTGTCTGGCTTGCCGAAAGCGCAGGAAGCGCTGCA
TGAGGCACGCTATGTGCTGCCCCGGGAACTACTGCAAAAATGGAATATGCATGCCCTCTGACCACAGCCA
TTTTCCTCGAGGGGAAATTGAGGAAAGCATCATTGAAAACCTTGGTAATGACCACAACGCCGCCGCGGGG
GATGGATATCCCAGAAGAACCACACTGACTTCAAAAATATATCACACCAAAGGACAAGAAGGCTCCGTCT
GCCTCCGATCATCAGACTGTGCCGCAGGGCTGTGTTGTGCAAGACACTTCTGGTCCAAGATCTGTAAACC
TGTCCTTAAAGAAGGTCAGGTGTGCACCAAGCACAAACGGAAAGGCTCCCACGGGCTGGAGATATTCCAG
CGCTGTTACTGCGGGGAAGGCCTGGCTTGCAGGATACAGAAAGATCACCATCAAGCCAGCAATTCTTCTA
GGCTCCACACCTGCCAGAGACACTAAACCGACAGTCTAAATATGATGGACTCTTTTTATCTAATATATGC
TACGAAAATCCTTTATGATTTGTCAGCTCAATCCCAAGGATGTAGGAATCTTCAGTGTGTAATTAAGCAT
TCCGACAATACCTTCCAAAAGCTCTGGAGTGTAAGGACTTTGTTTCTTGATGGAACTCCCCTGTGATTGC
AGTAAATTACTGTGTTGTAAATCCTCAGTGTGGCACTTACCTGTAAATGCAGCAAAACTTTTAATTATTT
TTCTAGAGGTGTGCTACATTGCCTTGTTTCTCTTGCATGTAAATTTTTTTTGTACACGGTTGATTGTCTT
GACTCATAAATATTCTATATTGAAGTAATTTTGGTTTACAGTTCTTAAATGTGTAACCCTTTCTGCTTCA
ATGTCTAGGGGGTCGAATGTAAGGAGAAATGGAATAGTCGGTGATAGGCATCTAAAATTTAACATGAAAG
TATCAGTTTATTTCCTGAGATGTGCTCTCTGCTTAGATTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACACATCTCTCCTCTCTAGTTC
TGTCTCTCTCGGCTGGTAGTCCTTGAAATAAAATTTAACATTTAATAATCATTAAGTTAGAAGTATAGAT
ACATTTGGGGCTCTGTGTGTGTGTGAGAGAGAGGGGGGGTTAAAATGATAAGATATATTGTCTGTGTGTG
AGTTAGTTTAAAGAGAATGTATCTACATTGATAAAACTCAAATGGCTTTGGTAATATGGGCTTGAATTTG
GTATAACTACCTTCAAAACTTCTAACAAGTGTGGTTGGTGCTTTTGCCTATAATCCCAGGATTTTGGAGG
CTGAGGCAGAGGGATGCCCATGAACTCAGGTCCATTCTGGCCAACTCTTTCTATAGAACAATGTTCAGTT
TCAAAAAAAACATCAACCAAAAGTAGTTAACAACCAATTAATATTCACCTAAGTGACCAACAGTTATTGG
AAGGGAGGGAATGCCCAAGCAAGTGATTCCAGATGATGGGCAGAATTCAGAAGAGATTATGCAGAAGGAA
GCCTGCCAACTTAAGCCAAATAATTAATTCTGAATATTTTAGATCCTCTGACATGCTGAAGAATTGTTTC
AATCACTTTGATTTAAAAAATAATTACTAAACAATCATAAATTCTAGAATGTAACACTTCTCTTGCCAAG
AAATTATTTCATTTTTTGCTTCACCTGTACTCCATTGATTGGAATGAGAATGGCTTTATTAAAAAAAAAA
AAAAA
Notes:The probe template was PCR amplified from IMAGE:30022799 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30022799 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_004956 same experiment
 EMAGE:30648 same embryo
 EMAGE:30647 same embryo
 EMAGE:32050 same embryo
 EMAGE:29253 same embryo
 EMAGE:30664 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS