Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:11687

Blk B lymphoid kinase ( MGI:88169)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11687
euxassay_006789_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11687Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11687_wholemount_possible.wlz
11687_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11687_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8203
Entity Detected:Blk, B lymphoid kinase ( MGI:88169)
Sequence:sense strand is shown

>T8203
CTTGACTGGAGGGCAGAGCTCCCACTGAGCTGCTTCTTAGGGCTGTTCATGGCGGTCTGATCACAACAGG
GGGCACACACACCTCTGTGTGCTGTTGGCAGGAAGCCACAAGCCACTGAAGCTGACTGAGATGAGAAGAA
TCCATCTGGGGATGGGATTGGCTTTTCTTAACTGGGTCCAGAGCTTCTGGTTGCCGCTAGAAAGTTCTTC
AACCACACAGACCCTGGGATCTGCACAGCTATGTTGAGAAGCTACTGAAGCCCTGCAAGGATGGGGCTGC
TGAGCAGCAAGAGGCAGGTCAGTGAGAAGGGCAAGGGCTGGAGCCCCGTGAAGATCCGCACCCAGGACAA
GGCTCCCCCACCCCTGCCACCCCTGGTTGTCTTCAACCACCTTGCCCCACCATCTCCTAACCAGGACCCA
GATGAAGAGGAGCGTTTTGTGGTGGCTCTGTTTGACTATGCCGCTGTGAATGACAGGGACCTTCAGGTGC
TGAAGGGTGAGAAGCTCCAGGTCTTGAGGAGCACTGGAGACTGGTGGTTGGCCAGGTCACTCGTCACAGG
AAGAGAAGGTTATGTGCCCAGCAACTTTGTGGCCCCAGTAGAGACTCTGGAAGTAGAAAAATGGTTCTTC
AGGACCATCAGCCGGAAGGATGCTGAGAGGCAGTTGCTGGCTCCGATGAACAAGGCCGGCTCCTTTCTCA
TCAGAGAGAGTGAGAGCAATAAAGGTGCCTTTTCCCTGTCCGTGAAAGATATCACCACCCAGGGGGAGGT
GGTCAAGCACTATAAGATCCGATCACTGGACAATGGAGGCTATTACATCTCCCCCCGGATCACCTTTCCC
ACCCTCCAGGCCCTGGTGCAGCACTATTCAAAGAAAGGGGATGGTTTGTGTCAGAAGTTGACTCTGCCCT
GTGTGAACCTGGCCCCGAAGAACCTTTGGGCCCAAGATGAATGGGAAATCCCCAGGCAGTCTCTCAAGTT
GGTCCGGAAACTTGGGTCTGGGCAGTTTGGCGAAGTCTGGATGGGTTATTACAAAAATAACATGAAGGTG
GCCATCAAGACCCTGAAGGAGGGAACCATGTCACCGGAAGCTTTCCTGGGCGAGGCCAACGTGATGAAAA
CCCTGCAGCATGAGAGGCTGGTTCGTCTCTACGCTGTGGTCACCAGAGAGCCCATTTACATCGTCACTGA
ATACATGGCCAGAGGATGCTTGCTGGATTTTCTGAAGACCGATGAAGGTAGCAGGTTGTCCCTTCCAAGG
CTGATTGACATGTCAGCCCAGGTTGCAGAGGGGATGGCTTACATAGAGCGCATGAATTCCATCCACCGTG
ACCTGCGGGCAGCCAACATCCTGGTGTCTGAGACGTTGTGCTGCAAAATCGCTGACTTCGGCTTGGCCAG
GATCATTGACAGTGAATACACTGCCCAAGAGGGGGCCAAGTTCCCCATCAAGTGGACCGCCCCGGAGGCC
ATCCACTTCGGGGTGTTTACCATCAAGGCTGATGTGTGGTCCTTCGGAGTCTTGCTGATGGAGATTGTCA
CCTATGGGCGCGTTCCCTACCCAGGAATGAGCAACCCTGAGGTCATCCGTAGCCTGGAGCACGGCTACCG
AATGCCATGCCCGGAGACATGTCCACCGGAGTTGTACAATGATATCATCACTGAGTGCTGGCGGGGCCGG
CCAGAGGAGCGGCCTACCTTTGAGTTCCTGCAGTCGGTGTTGGAGGACTTCTACACAGCCACGGAGGGCC
AATATGAGCTGCAGCCCTAGCAACCAATGGTCTCTTCAGGGCTCCCAGCCTGAGCCTCCTTCTGGACTCT
GACTTTGGGTTAATATGTTCACACTTAGCTCTTCTTCCAGGTAGGTTGCAGAATCAGGGAAGAATGGTGT
GCCTGCTTCTCAAGTGAGGGAGCCAGGAGACAAAGATGGCTTCATGGTGAGGCATGAGCTCTCAAGGCAC
AACCTCGGTCCACCTTTCACTGGCTGTGTGCCTTTGGCCAAGTTACTTTGCTGCTCTGTGTCGTCTCTTC
CTTGAATGTAAAATGAGCAAGGATTGTGTTAGAACTTACCTCCAGTTGTGTTCAGACCCCGATAGTCCCG
AAATCAGTCTGACCAGTTAGCGATGGACAGGATGTCAGGCTGTCATAACCCAGAGTGCAATCAGAGCTCC
CATTTCTCTCACCTTTTCAGTCTCATCAGCAAGTGCCTCCCTGTCTGCTGCTTCAGAACTATGGGTCAAT
CCTCCAGGTCCCCTGGCTGTGTGCCCCCTACCCATCCCTGCATGCACACTTTGGGACTTTTCTATAATAA
AGTCATGAGAATTGTAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:1178763 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:1178763 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11689 same embryo
 EMAGE:11688 same embryo
 EMAGE:11690 same embryo
 EMAGE:11686 same embryo
 EMAGE:11685 same embryo
 EurExpress:euxassay_006789 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS